Bacillus velezensis UCMB5113: BASU_2273
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Entry
BASU_2273 CDS
T02796
Symbol
sigA
Name
(GenBank) RNA polymerase major sigma-43 factor (sigma-A)
KO
K03086
RNA polymerase primary sigma factor
Organism
bamn
Bacillus velezensis UCMB5113
Pathway
bamn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bamn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BASU_2273 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bamn03021
]
BASU_2273 (sigA)
Transcription machinery [BR:
bamn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BASU_2273 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
DUF2316
Motif
Other DBs
NCBI-ProteinID:
CDG26564
LinkDB
All DBs
Position
complement(2452497..2453618)
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AA seq
373 aa
AA seq
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MADKQTHETETELTLDQVKEQLTETGKKRGVLTYEEIAERMSSFEIESDQMDEYYEFLGE
QGVELISENEETEDPNIQQLAKAEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVNLLSAK
EEITYAQKIEEGDEESKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLMKAVEKF
DYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPT
PEEIAEDMDLTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPSDHAAYEL
LKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLR
HPSRSKRLKDFLE
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaacaaacccacgaaacagaaacagaacttacattagaccaggtaaaagag
cagcttactgaaactggaaaaaaacgtggcgttttaacatatgaagaaattgctgaacgc
atgtccagctttgaaattgaatcagaccaaatggatgagtattatgaatttttaggagaa
caaggtgttgaattaattagtgaaaatgaagaaacggaagatcctaatattcaacagctt
gccaaagccgaagaagaatttgaccttaatgacctcagcgtaccgcctggcgtaaagatc
aatgatccagtccgcatgtaccttaaggaaatcggacgggtaaatcttctttctgctaaa
gaagaaatcacctacgctcaaaaaattgaagagggtgacgaggaatctaaacgcagactg
gctgaagcaaaccttcgtttagttgtcagcattgctaaacggtatgtcggccgcggcatg
cttttcttagacttgatccaagaaggaaacatgggtctcatgaaagccgtcgagaagttt
gactaccgtaaaggatataaattcagtacgtatgcgacttggtggatcagacaggcgatt
acacgcgccatcgctgaccaggcgagaacaatccgtatcccggttcacatggtggaaacc
atcaacaaattaatccgtgtgcagcgtcagcttcttcaggatcttggcagagagccgaca
ccggaagaaattgctgaagacatggatcttacacctgaaaaagtccgtgaaatattaaaa
atcgctcaagagcctgtttctttagaaacgccgatcggtgaagaagacgactcacatctc
ggtgacttcatcgaagaccaggaagcgacttctccgtcggatcatgcggcatatgagctt
ttaaaagaacagctggaagatgtgctggatacgttgacagatcgtgaagaaaacgtgctg
cgtctccgtttcggtctggatgacggacgcacaagaactttggaagaagtaggcaaagtg
tttggagtaacgagagagcgtattcgccaaattgaagcaaaagcgcttcgcaaattgaga
catccgagcagaagcaaacgtctgaaggattttctcgaatag
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