Bacillus velezensis UCMB5113: BASU_2556
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Entry
BASU_2556 CDS
T02796
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bamn
Bacillus velezensis UCMB5113
Pathway
bamn03030
DNA replication
bamn03410
Base excision repair
bamn03420
Nucleotide excision repair
bamn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bamn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BASU_2556 (polA)
03410 Base excision repair
BASU_2556 (polA)
03420 Nucleotide excision repair
BASU_2556 (polA)
03440 Homologous recombination
BASU_2556 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bamn03032
]
BASU_2556 (polA)
03400 DNA repair and recombination proteins [BR:
bamn03400
]
BASU_2556 (polA)
Enzymes [BR:
bamn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BASU_2556 (polA)
DNA replication proteins [BR:
bamn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BASU_2556 (polA)
DNA repair and recombination proteins [BR:
bamn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BASU_2556 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BASU_2556 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
UBA_3
HHH
F420_ligase
Motif
Other DBs
NCBI-ProteinID:
CDG26846
LinkDB
All DBs
Position
complement(2746073..2748712)
Genome browser
AA seq
879 aa
AA seq
DB search
MTERKKLVLVDGNSLAYRAFFALPLLSNEKGIHTNAVYGFAMILMKMLEDEKPTHMLVAF
DAGKTTFRHSTFKEYKGGRQKTPPELSEQMPFIRELLDAYNISRYELPEYEADDIIGTLA
VSAEKEGFEVKVVSGDKDLTQLATGKTTVAITRKGITDVEDYTPEHVQEKYGLTPLQIID
MKGLMGDSSDNIPGVPGVGEKTAIKLLKQFHSVEKLLDSIDEVSGKKLKEKLEEYKEQAL
MSKELATIMTNAPIEVKPEDLDYQGFDREQVVAIFKDLGFNTLLERLSEESGETAEENFE
DINVETAEEITEDMLVSPSALVVEQIGDNYHEEPILGFSIVNETGLYYIPKEIAIQSEAF
KSWAEDESMKKWVFDSKRSVVALRWQGIELKGTEFDALLAAYIINPGNSYDDVASVAKEY
GLNIVSKDEAVYGKGAKRAVPAEKELADHLARKASAVNSLRDKLLDALEENNQLELYEDL
ELPLALILGEMESMGVKVDVERLKRMGEELKAKLKEYEEKIHDIAGEPFNINSPKQLGVI
LFEKLGLPPVKKTKTGYSTSADVLEKLADKHDIVAHILQYRQIGKLQSTYIEGLLKVTRK
DSHKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSEPDWLIFAADYSQI
ELRVLAHISKDENLIEAFTNDMDIHTKTAMDVFHVSEDEVTQAMRRQAKAVNFGIVYGIS
DYGLSQNLGITRKEAGAFIDRYLESFPGVKAYMEESVQEAKQKGYVTTLMQRRRYIPELT
SRNFNLRSFAERTAMNTPIQGSAADIIKKAMIDMAAELKEKNLKARLLLQVHDELIFEAP
KEEIEILEKLVPEVMEHALALDVPLKADYASGPSWYDAK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacgaaaaaaattagtgcttgtcgacggaaacagtctggcgtaccgggcgttt
tttgcattgccgcttttaagcaatgaaaaaggcatccatacaaatgccgtatacgggttt
gcgatgattttaatgaaaatgctggaagatgaaaagccaacccacatgctggtggctttt
gatgcgggaaaaaccactttccgccacagcacgtttaaagaatataaaggcggaagacaa
aaaacgccgccggagctttcagaacagatgccgttcatccgcgagctccttgatgcctat
aacatcagccgctacgagcttcctgaatatgaagcggacgatattatcggcacccttgcc
gtatctgctgaaaaagaaggcttcgaagtaaaggtagtttcgggggacaaggacttaacc
cagcttgcaaccgggaaaacgaccgttgccattacgagaaaaggcattaccgacgtggaa
gattacacgccggagcacgtgcaagaaaagtacggtctgacccctttgcaaatcattgat
atgaagggattaatgggggattcatccgataacataccgggcgtccccggcgtcggagaa
aaaaccgcgattaagcttttaaagcagttccattcggttgagaaactgcttgattccatt
gatgaagtcagcggaaaaaaattaaaagaaaagcttgaagaatataaggaacaagccctg
atgagcaaagagctggcgacgattatgacaaatgcgccgattgaagtcaagcccgaagat
ttagattaccaagggtttgaccgtgaacaagttgttgccatttttaaagacctgggtttt
aatacgcttcttgagcggctcagtgaagaaagcggggaaacggcggaagaaaattttgaa
gacatcaatgtcgaaacggcagaagaaatcaccgaagatatgctcgtttcaccgtccgct
ttggtggtcgaacaaatcggtgataactatcacgaagaaccgatcctcggcttttccatc
gtgaatgaaacaggtctttattatattccgaaagaaatcgccattcagtctgaagctttt
aaatcttgggctgaagatgaatcgatgaaaaaatgggtgttcgacagcaaacgttccgtc
gtcgctttgcgctggcagggaattgagctgaagggaacggaatttgacgcacttcttgct
gcctacattataaacccgggcaattcgtacgacgatgtcgcgagcgtagcgaaagaatac
gggctgaatatcgtttcaaaagatgaagcggtatacggaaaaggcgcaaagcgcgccgtt
ccggctgaaaaagagcttgccgatcatctcgcgcggaaagcgtctgctgttaacagcctc
cgtgacaaactgctcgacgctttggaagaaaataatcagcttgaattatatgaagatctc
gaactcccgcttgcgcttattctcggagaaatggaatcaatgggcgtcaaagtggatgtt
gaaagactgaagcgaatgggcgaagagcttaaggcgaagctgaaagaatatgaagaaaaa
atccatgacatcgccggtgagccgtttaacatcaattcaccaaaacagctcggcgtcatt
ctgtttgaaaagctcggcctgccgccagtaaagaaaacaaaaacaggctattccacttca
gctgatgtgcttgagaagctcgcagacaaacatgatatcgtcgcgcacattctgcaatac
agacaaatcggcaagcttcaatcgacttatatagaagggctgctgaaggtcacgcgcaag
gattctcataaggtgcatacacgattcaatcaggcgttgactcaaaccggacgcctcagc
tcaacggatccgaacctgcaaaatattccgatccggctggaggaagggcggaaaatccgt
caggctttcgtaccgtccgaaccggactggcttattttcgccgccgattattcacaaatt
gaattaagggtgcttgcgcatatttcaaaagatgaaaatctgatcgaagcgtttacgaat
gacatggacattcacacaaaaaccgccatggacgtatttcatgtcagtgaagatgaagtg
acacaagcgatgcgccgccaggcaaaggccgtcaatttcggcattgtttacggcatcagt
gattacgggctgtcacaaaacctcggcatcacccggaaagaagcgggcgcttttatagac
cgctatttggagagcttcccgggcgtcaaggcgtatatggaagagtcggtgcaggaagcg
aagcaaaaaggatatgtcacgacacttatgcagcgccgccgctatattcctgagctgacc
agccgcaacttcaacctgcggagctttgcggaacggacggccatgaatacgccgattcag
ggaagcgccgccgatattattaaaaaagccatgattgacatggcagctgagctgaaagaa
aaaaacctgaaggcgcgactgctgcttcaggtgcacgatgaattgatttttgaagcgcct
aaggaagaaattgaaatattagagaagctggttcctgaagtgatggagcatgctttggca
ttagacgtgccgctgaaggcggattatgcttcagggccgtcttggtacgatgcaaaataa
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