Bacillus velezensis UCMB5113: BASU_3065
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Entry
BASU_3065 CDS
T02796
Symbol
sigL
Name
(GenBank) RNA polymerase sigma-54 factor (sigma-L)
KO
K03092
RNA polymerase sigma-54 factor
Organism
bamn
Bacillus velezensis UCMB5113
Pathway
bamn02020
Two-component system
bamn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bamn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BASU_3065 (sigL)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BASU_3065 (sigL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bamn03021
]
BASU_3065 (sigL)
Transcription machinery [BR:
bamn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BASU_3065 (sigL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_32
HTH_IclR
Sigma70_r4
HTH_3
HTH_21
Sterile
YtzH
Motif
Other DBs
NCBI-ProteinID:
CDG27346
LinkDB
All DBs
Position
complement(3255721..3257031)
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AA seq
436 aa
AA seq
DB search
MDIKLQQTQMLKPQLTQELKQAITLLGYNSAELAGYIDELSLENPLIERKETDTPPLSYH
KTSKNRMKERDGSQQIRLTRKTLQDSLKQQALDMKLSDDEKKIFNYLIHSLDSNGYLKED
IPAAADHVSASQEETEAVLKKLQSLEPAGIGARSLQECILLQLRRLPERNEQAEWIADAY
FELFARKNWKALTLKTGIPLKDIQDIADMISALDPRPGLRYAHEEPGFYVEPDIFITVKN
GIIQARLNSRSFPDIQLHTHYQPLLSAAGCRDTKNYLSAKYQEWRWLNRALSQRKQTITR
IIGVLTERQESFFLTGKSGMQPLTLREVAETLELHESTISRAIKGKYVQTPYGLYEMKTF
FSAKAESSGDGGASNYAVKAHLEALVGKEDKKKPFSDQKLADLLHEQYDIRISRRTVAKY
RDQLNIPPSSARKRYS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaaacttcagcaaacacaaatgttaaagcctcaattaacgcaagagcttaaa
caggctatcacattactcggatacaattccgcggaactggccggatatattgatgagctc
tcactggaaaaccctctgattgaacgaaaggaaacagacacgccgccactatcttaccat
aaaacaagtaaaaacaggatgaaagaacgggacggaagccagcagatcagacttacccgc
aaaacactgcaggattcgctcaaacagcaagccttagatatgaagctgtccgatgatgag
aaaaagattttcaattatctgatacattcattggactcaaacggatatttaaaagaggac
ataccagctgccgccgaccatgtatccgcttcacaagaggagacggaagcggttctgaaa
aagcttcaatcccttgagcccgcgggaatcggcgccaggtctttgcaggaatgcatcctt
cttcagctccgccgtcttcccgagcggaacgaacaggcggaatggattgccgacgcctat
tttgagctatttgcaagaaagaactggaaagcgcttacactaaaaacgggcattccgctt
aaagacattcaggacatcgctgacatgatcagcgcccttgatccgaggccggggctccgt
tatgcgcatgaggagccgggtttttacgtggaaccggatattttcatcacagtgaaaaac
ggcatcattcaagcgcggctcaacagccgttcgtttcctgacatccagcttcatacccat
tatcagccgctcttgtcagctgccgggtgccgtgacacgaaaaattatctgtcggcaaaa
tatcaggaatggcgctggctgaaccgggctttgtcgcaaagaaaacaaacgatcacgaga
attatcggcgtcctgactgaacggcaggaatccttttttctcacaggaaaaagcggaatg
cagccgctgaccttaagagaggtggcggaaacgctggagctccacgaatcaacgatcagc
cgggccatcaaagggaagtacgttcagacgccgtacggactgtatgaaatgaaaacattt
ttctcggcgaaagctgaatcgtcgggggacggcggcgcctccaattatgccgtaaaagcg
catctggaggcattggtcggtaaagaagataaaaagaaacctttttcagatcaaaagctt
gccgatctgctgcatgaacaatatgacatccgaatctcaaggcgcaccgtcgccaaatac
cgtgaccaattaaatattccgccgtcatcggcgagaaaacggtacagctga
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