Bacillus velezensis UCMB5113: BASU_3113
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Entry
BASU_3113 CDS
T02796
Symbol
yvcJ
Name
(GenBank) GTPase
KO
K06958
RNase adapter protein RapZ
Organism
bamn
Bacillus velezensis UCMB5113
Brite
KEGG Orthology (KO) [BR:
bamn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bamn03019
]
BASU_3113 (yvcJ)
Messenger RNA biogenesis [BR:
bamn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BASU_3113 (yvcJ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_22
Myosin_head
AAA_16
AAA_18
NB-ARC
AAA_28
AAA_24
DUF1993
Motif
Other DBs
NCBI-ProteinID:
CDG27394
LinkDB
All DBs
Position
complement(3299552..3300439)
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AA seq
295 aa
AA seq
DB search
MSMNENHDIQLVIITGMSGAGKTVAIQSFEDLGYFCVDNLPPSLLPKFLELMKESSSKMS
KVALVMDLRGREFFDRLIEALDEMAENPWITPRILFLDAKDSILVTRYKETRRSHPLAAT
GLPLEGIALERQLLEELKGRSQLIYDTSDMKPRDLREKIVAHFATNQGETFTVNVMSFGF
KYGLPIDADLVFDVRFLPNPFYIESMRPLTGKDEEVSSYVMKWNETQKFIEKLVDLLGFM
LPSYKREGKSQLVIAIGCTGGQHRSVTLAEYLADYFKKDFYTHVTHRDIEKRSRK
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgaatgaaaaccatgatattcagctcgtcatcattacgggaatgtctggagcg
gggaaaaccgtcgccattcaaagctttgaggatctcggctatttttgcgtcgacaatctg
ccgccttccttgctgccgaaatttttggagctgatgaaagaatcaagttcaaaaatgagc
aaggtcgcgcttgtcatggatctgcggggacgtgaattttttgacaggctgattgaggcg
ctggatgaaatggcggaaaatccgtggattacaccgcgcattctctttttagacgctaag
gattccatccttgtgacgagatacaaagaaacgaggcgttctcacccgctggccgctacc
gggcttcctctcgaaggaatcgcgctggaacgccagctgcttgaagaattgaaagggcgc
tctcagctgatctatgacacatcggatatgaaaccgcgtgatctgcgtgaaaaaatcgtg
gcgcatttcgccacgaaccaaggtgaaacatttacagtgaacgtaatgtcattcgggttc
aaatacgggcttccgatagatgccgacctcgtgtttgatgtaaggtttctgccgaatccg
ttctacattgaaagcatgaggccgcttacggggaaagatgaggaagtgtcatcctatgtg
atgaagtggaacgaaacacaaaagtttattgaaaagcttgttgatctgctcggctttatg
cttccgtcttataagcgggaaggtaaaagccagcttgtcatcgcgatcggctgtacgggc
ggccagcaccgctccgtcacgctcgctgagtatttggctgactattttaaaaaagatttc
tatactcatgtcactcaccgggacattgaaaagagaagccggaaatga
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