Entry |
|
Symbol |
uvrA
|
Name |
(GenBank) excinuclease ABC (subunit A)
|
KO |
K03701 | excinuclease ABC subunit A |
|
Organism |
bamn Bacillus velezensis UCMB5113
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:bamn00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BASU_3145 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:bamn03400]
BASU_3145 (uvrA)
DNA repair and recombination proteins [BR:bamn03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BASU_3145 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BASU_3145 (uvrA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(3330173..3333046)
|
AA seq |
957 aa
MAIDRIEVKGARAHNLKNIDVTIPRDQLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDAIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARVGKP
HCPEHGIEITSQTIEQMVDRILEYPERTKLQVLAPIISGRKGAHVKVLDQIRKQGYVRVR
IDGEMAELSDDIELEKNKKHSIEVVIDRIVVKEGVAARLSDSLETALRLGEGRVMIDVIG
QEELMFSEHHACPLCGFSIGELEPRLFSFNSPFGACPTCDGLGLKLEVDPELVIPNPELS
LKEHAIAPWTPISSQYYPQLLQAVCRHYGIDMETPVKDLPKHQLDKVLYGSGNERIYFKY
ENDFGQVRENEIEFEGVLRNIERRYKETSSDYIREQMEQYMSQKSCPTCKGYRLKKEALA
VLVNGRHIGTITELSVGDALEFFKNLTLSEKDMQIADLILREIVERLSFLDKVGLDYLTL
SRAAGTLSGGEAQRIRLATQIGSRLSGVLYILDEPSIGLHQRDNDRLISALKNMRDLGNT
LIVVEHDEDTMMAADYLIDIGPGAGIHGGRVISAGTPEEVMNDADSLTGRYLSGAQFIPM
PPERRKPDGRFIEIKGASENNLKKANAKFPLGTFTAVTGVSGSGKSTLVNEILHKALAQK
LHKAKAKPGSHKEIKGLDHLDKVIDIDQAPIGRTPRSNPATYTGVFDDIRDVFAQTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVTYKG
KSISDVLDMTVEDALSFFENIPKIKRKLQTLADVGLGYVTLGQPATTLSGGEAQRVKLAS
ELHKRSTGRTLYILDEPTTGLHVDDIARLLVVLQRLVDNGDTVLVIEHNLDIIKTADYIV
DLGPEGGAGGGTIVASGTPEEVVEVKESYTGRYLKPVMERDKKRMKTLLAEKETAAT |
NT seq |
2874 nt +upstreamnt +downstreamnt
atggcaattgaccggatcgaggtgaaaggcgcaagggcgcacaatttaaaaaacattgat
gtaacgattccgcgggatcagctcgtcgtcgtgacggggctgtccggatcgggaaaatca
tcccttgcctttgacaccatttacgcggaaggacagaggcggtatgttgaatcgctttct
gcctatgcacgccaatttttagggcagatggataagccggacgttgatgcgatcgaaggg
ctttccccggcgatcagcattgaccagaaaacgacaagccgcaatccgcggtcaaccgtc
ggaacggtaacggagatttatgattatctccggctgctgtacgcgagagtcgggaagccg
cactgcccggagcacggcattgaaattacgtcgcaaacgattgaacagatggttgaccgg
attcttgaatatccggagcggacgaagcttcaagtgcttgcgcctatcatctcaggcaga
aaaggcgcccatgtcaaagtgcttgaccaaatcagaaagcaaggttacgtaagggtgcgg
attgacggagaaatggccgagctttccgacgatattgaacttgaaaaaaacaaaaagcat
tccattgaagtagtcattgaccggattgtcgtcaaggaaggggttgccgcccggctttcc
gactcgctggaaaccgcgctccgtttaggggaaggccgtgtcatgatagatgtcatcggt
caggaggagctgatgttcagcgagcatcacgcctgtccgctgtgcggtttttctatcggg
gagcttgaaccccggctgttttcgtttaacagcccgttcggcgcctgtccgacttgcgac
ggtctcggcttgaagctggaagtggaccctgagctcgtcatccccaatcccgagctgtca
ttaaaggaacacgccatcgcgccgtggacgccgatcagttcacaatattatccgcagctg
cttcaggcggtctgccgccattacggcattgatatggagactccggtcaaagacctgccg
aagcatcagcttgataaagtgctgtacggcagcggcaatgaacggatttactttaaatac
gagaatgatttcggacaagtgcgcgaaaatgaaattgaatttgaaggtgtgctgcgcaat
attgagagacggtataaagagacaagctccgattatatccgtgaacagatggagcagtac
atgtcacagaaatcgtgcccgacgtgcaaaggctaccggttgaagaaagaagcgcttgcc
gttttggtcaacgggcgtcatatcggaaccattaccgagctttccgtcggcgatgcgctg
gaatttttcaaaaacctgacgctgtcggagaaagatatgcagattgccgatttaatttta
agagagattgtggagcggctcagcttcttagataaagtcggtcttgattacctgacgctg
agccgggcggcgggcacgctgtcaggcggagaagcccaacgcatcaggcttgcgacgcag
atcggctcccgtttgtcaggcgtcctgtatattcttgatgagccgtccatcggccttcac
cagcgtgacaatgaccgtctgatcagcgcgctgaaaaacatgagggatctcggcaacaca
ctgattgtcgttgagcatgatgaggatacgatgatggctgccgattatttgatagatatc
ggtccgggcgccggcattcacggcggccgcgtcatatcggcggggacgcctgaagaagtg
atgaatgatgcggactctctgaccggacgctatttgtcaggggctcaattcatcccgatg
cctccggagagaagaaagcctgacggccggttcattgaaatcaaaggcgcttcagaaaac
aacctgaaaaaagcgaacgccaaattcccgctcggcacttttacggcggtgacaggtgtg
tccggttccggaaaaagcacgcttgtgaatgaaattctgcataaggcgcttgcgcaaaag
cttcataaagccaaagcgaaaccgggaagccataaagaaatcaaaggcctcgaccacctt
gataaggtgatcgacatcgaccaggcgccgatcggccggacaccgagatcaaatccggca
acttatacgggcgtgtttgatgatatccgcgatgtattcgcgcagacaaatgaagcaaag
gtgcgcggctataaaaaaggccggttcagttttaatgtaaaaggcgggcgctgtgaggcc
tgccgcggcgacggcatcatcaaaattgagatgcatttccttcctgacgtgtacgtcccg
tgtgaagtgtgccacggcaaacgttacaaccgggagacgctggaggtcacatacaaagga
aaaagcatttctgacgttctggatatgacggtggaagatgctctgtccttctttgaaaat
atcccgaaaatcaaacgcaagcttcaaacgcttgccgatgtcggactcgggtatgtgacg
ctcggccagccggcgacgacgctgtcaggcggagaagcgcagcgcgttaagcttgcttcc
gaactgcataagcgttccacaggccggacgctgtatattctggacgaaccgacgacaggc
ctccacgttgatgatatcgcaaggctattggttgtgcttcaaagactcgtcgataacggt
gataccgttttggtcattgaacacaatctcgatatcattaaaacggcggactacatcgta
gacctgggacctgaaggcggagcgggcggcggcacgatcgtagcctccgggacgcctgaa
gaagttgtcgaagtgaaagaatcatatacgggccgctatctgaaaccggtaatggaacgt
gataaaaaacggatgaaaacattgctggctgaaaaagaaacggcagccacataa |