Bacillus velezensis AS43.3: B938_08520
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Entry
B938_08520 CDS
T02382
Symbol
polC
Name
(GenBank) DNA polymerase III PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
bamp
Bacillus velezensis AS43.3
Pathway
bamp03030
DNA replication
bamp03430
Mismatch repair
bamp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bamp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B938_08520 (polC)
03430 Mismatch repair
B938_08520 (polC)
03440 Homologous recombination
B938_08520 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bamp03032
]
B938_08520 (polC)
03400 DNA repair and recombination proteins [BR:
bamp03400
]
B938_08520 (polC)
Enzymes [BR:
bamp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B938_08520 (polC)
DNA replication proteins [BR:
bamp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B938_08520 (polC)
DNA repair and recombination proteins [BR:
bamp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B938_08520 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_a_NII
DNA_pol3_finger
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
DEDDh_C
RNase_H_2
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AFZ90726
LinkDB
All DBs
Position
1702009..1706322
Genome browser
AA seq
1437 aa
AA seq
DB search
MEQLSVNRRQFQILLQQLNMTDDTFMTYFEDGEIDKLTIHKAEKAWHFQFRFKALLPYQI
YDSFMMRLTQSFAHIARVTSSVQVIDPTVTEELVQDYWTRCIEELEGTSPPMVALLNQQK
PKLKGNKLIVKTKTDTEASALKNKYSALIQHSYRQFGFPELQLDTEIFVSDQEVQKFREQ
KLAEDQERAMQALIEMEKKEKEGDEDQAPSGPLVIGYQIKENEEIRTLDSIMDEERRITV
QGFVFDAETRELKSGRTLCIFKITDYTNSILVKMFAREKEDAALMKTLKKGMWVKARGSI
QNDTFVRDLVMIANDVNEIKAKTREDTAPEGEKRVELHLHSPMSQMDAVTGIGKLVEQAK
KWGHEAIALTDHAVVQSFPDAYSAAKKHGIKMIYGMEANIVDDGVPIAYNPAHRLLEEDT
YVVFDVETTGLSAVYDTIIELAAVKIRGGEIIDKFEAFANPHHPLSATTIELTGITDDMV
RDAPDVVDVVRDFKEWIGDDVLVAHNASFDMGFLNVAYKRLLKTEKAKNPVIDTLELARF
LYPEFKNHRLNTLCKKFDIELTQHHRAVFDAEATGYLLLKMLKDAAEKDIFYHDQLNENM
GQSNAYQRSRPYHATLLAVNETGLKNLFKLVSISHIQYFYRVPRIPRSQLNKYREGLLIG
SACDRGEVFEGMMQKSPEEVEDIASFYDYLEVQPPEVYRHLLQLELVRDEKALKEIIANI
TKLGEKLNKPVVATGNVHYLNDEDKIYRKILISSQGGANPLNRHELPKVHFRTTDEMLEA
FSFLGAEKAKEIVVDNTQKVASMIDEIKPIKDDLYTPKIDGADEEIREMSYQRARSIYGE
ELPEIVEARIEKELKSIIGHGFAVIYLISHKLVKRSLDDGYLVGSRGSVGSSLVATLTEI
TEVNPLAPHYVCPSCRYSEFFNDGSVGSGFDLPDKSCPSCGTPLKKDGHDIPFETFLGFK
GDKVPDIDLNFSGEYQPHAHNYTKVLFGEDNVYRAGTIGTVAEKTAYGYVKGYAGDHNLH
MRGAEIDRLVQGCTGVKRTTGQHPGGIIVVPDYMDIYDFSPIQFPADATGSEWKTTHFDF
HSIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFQGTESLGVTEEQIG
CKTGTLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIHNNTCELS
EVIGCRDDIMVYLIYQGLEPSLAFKIMEFVRKGKGLTPEWEEEMKKNNVPNWYIDSCKKI
KYMFPKAHAAAYVLMAVRIAYFKVHHALLYYAAYFTVRADDFDIDTMIKGSTAIRAVMDD
ISSKGLDASPKEKNLLTVLELALEMCERGYSFQKVDLYRSSASEFIIDGNSLIPPFNSIP
GLGTNAALNIVKARKEGEFLSKEDLQKRGKVSKTILEYLDRHGCLESLPDQNQLSLF
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggaacagttatcagtaaacagaagacagtttcagattcttctgcagcagcttaatatg
acagatgataccttcatgacatactttgaagacggagagattgataaactgacaatccat
aaagcagaaaaggcctggcatttccaatttcgctttaaggctcttttgccgtatcaaata
tatgattcattcatgatgaggttaacacaatcgtttgctcacatcgcccgtgtcacatcg
tctgttcaggtcatcgaccctacagtgacagaggagcttgtacaggattattggacacgc
tgtattgaagagcttgaaggaacctcgccgccgatggtggctcttttgaatcagcagaag
ccgaagctcaagggaaacaaactgatcgtgaaaacaaaaacagatacagaagcatctgcg
ctcaaaaataaatacagcgcactgattcagcacagctaccgccaattcggctttccggaa
ctgcagctggataccgaaattttcgtatctgaccaagaagtccagaaattccgcgagcaa
aagcttgctgaagatcaggagcgggcgatgcaggcgcttatcgagatggagaagaaggaa
aaagagggcgatgaggatcaggcaccgtccggaccgcttgtcatcggctatcaaattaaa
gagaacgaagaaatccggacgcttgacagcatcatggatgaagaaagaagaattacggtg
caggggtttgtgtttgatgctgaaacacgcgagctgaaaagcggacgcacgctctgtatt
ttcaaaatcacggactatacaaacagcattttagtaaaaatgttcgccagagaaaaagaa
gacgccgctttgatgaaaacgctgaaaaaaggcatgtgggtgaaggcgcggggaagcatt
caaaacgatacattcgtcagagacctcgtcatgattgcaaatgacgtgaatgaaataaaa
gccaaaacccgtgaagacaccgctcctgaaggcgaaaaacgggttgagcttcatctgcat
tctccgatgagccaaatggatgctgtaacgggcatcggaaagcttgtcgaacaggcgaaa
aaatggggacatgaagcgattgcgttaactgatcatgccgttgtgcagtctttcccggat
gcctattccgccgcgaaaaaacacggcattaaaatgatttacggaatggaagccaatatc
gtagatgacggcgttccgatcgcatacaatccagctcaccgtcttctggaagaagacaca
tacgttgtctttgacgttgaaacgacaggtctgtccgcagtgtatgacaccatcattgag
cttgctgcagtcaaaataagaggcggagaaattatcgataaattcgaagcgttcgccaat
ccgcaccatccgctgtcagcaacgacgatagagcttaccgggattacggacgacatggtc
cgcgacgctcccgatgtcgttgacgtcgtccgggattttaaagaatggatcggcgatgac
gtgcttgtggctcataacgccagctttgatatgggatttttaaatgtggcgtacaagcgt
cttttgaaaacggaaaaagcaaaaaatccggtcattgatacgctggaactcgcgcgtttc
ctgtatcctgagtttaaaaatcaccgcttaaatacgttatgtaagaagtttgatatcgaa
ttaacccagcatcaccgagcggtctttgacgctgaagcaacgggctacctgctgttgaaa
atgctcaaagatgccgctgaaaaagacattttttatcatgatcagctgaatgagaatatg
ggacaatccaatgcttatcagagatcaaggccttatcacgctacattgcttgccgtgaat
gagaccggccttaaaaatctgtttaagctcgtgtccatttctcatattcaatatttctac
agagtgccgcgcattccgaggtcgcagcttaataaatacagagaaggtctgttaatcggc
tctgcctgtgacaggggtgaggtctttgaaggcatgatgcaaaaatctcctgaagaggtt
gaagatatcgcatccttctatgattatcttgaagtgcagccgccggaagtatacagacac
cttctgcagcttgagctcgtccgggatgaaaaagcgctgaaagaaatcatcgccaacatt
acaaagctcggagaaaaattgaataagccggtcgtggctacgggaaatgtccactattta
aacgatgaggataaaatttaccggaagatcttaatatcttcccaaggcggcgccaacccg
ttaaacagacacgaactgcctaaagtgcacttcagaacgacagatgaaatgctggaggct
ttctccttcctcggtgcggaaaaagcgaaagaaatcgtggttgacaatacgcagaaagtc
gcttcgatgatcgatgagatcaaaccgatcaaagacgatctgtacacgccgaaaattgac
ggggccgatgaagaaatccgtgaaatgagctatcagcgcgccagaagcatttacggtgaa
gagcttcccgaaattgtggaagcgagaatagaaaaagaattaaaaagtatcatcggtcat
ggattcgccgttatttatctcatctctcataagcttgtaaaacggtctctggatgacggt
tatctcgtcggctcccgggggtccgtcggttcatcgcttgtggcgaccttaacggaaatc
actgaagtgaacccgctcgctccgcactacgtgtgcccgagctgccgatattccgaattc
tttaatgacggatcagtcggttccggttttgaccttccggataaaagctgcccgtcttgc
ggcacccctttgaaaaaggacggacatgatatcccgtttgaaacgttcttaggctttaaa
ggtgacaaagtacccgatatcgacttgaacttctcaggtgagtaccagccccatgcccat
aactacacgaaagtattgttcggtgaagataacgtgtatcgcgcgggaacgatcggcacc
gtcgcggaaaagacggcttacggatatgtgaaaggctatgcgggcgatcacaacctacac
atgcgcggcgcggagatcgaccgtctggttcaaggctgcaccggcgttaagagaacgacc
ggccagcacccgggggggattatcgttgtcccggattacatggatatttacgatttttca
ccgatacaattcccggcagatgcgacggggtctgaatggaaaacgactcattttgacttc
cactccattcatgacaacctgctgaagcttgatatattagggcacgatgatccgaccgtt
atccggatgctccaggatttaagcggaattgatccgaagacgattccgacagatgatccg
gaagttatgaagattttccaaggcacagaatcgctcggcgttactgaagagcagatcggc
tgtaaaacggggacgctcggcattcctgaattcgggacgcgatttgtgcggcagatgctt
gaggatacgaagccgacgacgttctccgagcttgtccagatttccgggctttctcacgga
acggacgtatggctcggcaatgcgcaggaactgatacacaacaatacgtgtgaactgagc
gaagtgatcggctgccgtgatgacattatggtttacttgatctatcagggccttgagcct
tcactggcctttaaaatcatggaattcgtccgtaaaggcaaaggcctgacgccggaatgg
gaagaagaaatgaaaaagaacaatgtgccgaactggtatattgattcatgcaaaaaaatc
aaatacatgttcccgaaagcccacgccgccgcatacgtgctgatggcggtgcggattgca
tactttaaagtgcatcacgcgcttttatattatgctgcgtattttaccgtccgcgcagat
gactttgacattgatacaatgattaaaggctcgactgccatcagagcggtgatggatgat
atcagctctaaagggcttgatgcttcgccgaaggagaaaaacctccttaccgtgttagag
cttgcgcttgaaatgtgtgagcgcggctattccttccagaaggtcgatctataccgttcg
agcgcttcggaatttatcattgacggcaacagtcttatcccgccgttcaactcaattccg
ggactcggaaccaacgccgctctcaatattgtgaaagcgcggaaggaaggggagttcctt
tcaaaagaggatcttcaaaaacgcggaaaagtgtcaaaaaccattttagagtatttagac
cgtcacggctgtcttgagtcgcttccggaccaaaatcagctgtctctgttttaa
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integrated database retrieval system
