Bacillus velezensis AS43.3: B938_08560
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Entry
B938_08560 CDS
T02382
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bamp
Bacillus velezensis AS43.3
Brite
KEGG Orthology (KO) [BR:
bamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bamp03016
]
B938_08560 (truB)
Enzymes [BR:
bamp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
B938_08560 (truB)
Transfer RNA biogenesis [BR:
bamp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B938_08560 (truB)
Prokaryotic type
B938_08560 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
DUF2922
Motif
Other DBs
NCBI-ProteinID:
AFZ90734
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All DBs
Position
1711686..1712615
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AA seq
309 aa
AA seq
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MVNGVLLLHKPVGMTSHDCVMKIRKLLKTKKVGHTGTLDPAVSGVLPICVGRATKIVEYV
TDKSKTYDAEITLGFSTSTEDQTGETVSVKPVKEPLKEADIKAVLDELKGPQEQVPPMYS
AVKVNGKKLYEYARAGIEVERPKRNITIEDIALTSPVTYKEDTASFRFTVTCSKGTYVRT
LAVTIGEKLGYPAHMSHLIRTASGDFSLDECFTFEELEQQVSDGTVAEHAVPIERALNHL
PKWVISDTLAKKAENGSVFDIPAEFSAMTADARIAVCTEDGECVAIYMPHPSKKGLLKPA
KVLMQKSEQ
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggttaacggagttctccttttacataaaccggtcggcatgacttctcacgactgtgtc
atgaaaataagaaaactgttaaaaacaaagaaagtcggacatacgggaacgcttgatccg
gcagtgtcaggcgtactgccgatctgtgtcggacgggccacaaagattgttgagtacgtc
accgacaagtcaaaaacgtatgatgctgagatcactctcggcttctccacatcgaccgaa
gaccagactggagaaacggtcagcgtaaaacctgtcaaggagccgctgaaagaagcggat
atcaaagccgttttagacgaactgaagggaccgcaggagcaagtgccgccgatgtattcc
gctgtaaaggtcaacgggaaaaagctctatgaatacgccagagccggtattgaagtggag
cggccgaagcggaatatcacgattgaagatatcgcgctcacttcccctgtcacttataaa
gaagacacagcatcattccgctttacagtcacgtgctcaaagggcacttacgtgagaaca
ttggcggtgacaatcggtgaaaaactcggctatcccgcgcatatgtcgcatctcatccgc
accgcttccggcgatttcagccttgatgagtgtttcacgtttgaggaacttgaacagcag
gtttcagacggcacggttgcagagcatgccgtgccgattgaaagagcgctcaatcatttg
ccgaaatgggtcataagtgatacattagctaagaaagctgaaaacgggtcagtgtttgac
atcccggcggaattttctgcaatgacagctgacgcccgtatagcggtctgtactgaagac
ggagaatgtgtggccatttatatgccgcatccttcaaaaaaaggactgctgaaaccggct
aaagtgctcatgcaaaaaagcgaacaataa
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