Bacillus velezensis AS43.3: B938_12110
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Entry
B938_12110 CDS
T02382
Name
(GenBank) hypothetical protein
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bamp
Bacillus velezensis AS43.3
Brite
KEGG Orthology (KO) [BR:
bamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bamp03019
]
B938_12110
03009 Ribosome biogenesis [BR:
bamp03009
]
B938_12110
Enzymes [BR:
bamp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B938_12110
Messenger RNA biogenesis [BR:
bamp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B938_12110
Ribosome biogenesis [BR:
bamp03009
]
Prokaryotic type
rRNA helicases
B938_12110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFZ91436
LinkDB
All DBs
Position
complement(2519694..2521010)
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AA seq
438 aa
AA seq
DB search
MKETKFDGYNLKPFIIDAVHRLGFYEPTDIQKRLIPAVLKNESVIGQSQTGTGKTHAYLL
PILNRIDPGSDTVQAVITAPTRELANQIHQEALKITQGAEDEPIRTKCFIGGTDKQKSID
KLKTQPHLVVGTPGRIADLIKAQALNVYKAQSLVIDEADLMLDMGFLEDVDYIGSRMPEE
LQMLVFSATIPEKLKPFLKKYMENPKYAHVEPKRITAEKIEHVLVPSKQRDKDKLLFDMM
SHLNPYLGIVFANTKNTADHIAKYLTEKGMRVGLLHGGLTPRERKKVMKQINDLEFTYVI
ATDLAARGIDIKGVSHVINYELPDDLDFYVHRVGRTARAGSSGQALTIYELSDEDALARL
EKMGIVFDYAELVNGEWKKGDDRHRRKNRKKTANEADQIAKRLVKKPKKVKPGYKKKMSY
EMEKIKKKQRRNQSNRGK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaactaaatttgatggatacaacttaaaaccgtttattatagatgcagttcac
cgccttggtttttatgaaccgacagatattcaaaagcgtctgatacctgccgtactgaaa
aacgaaagcgtgatcgggcagtcccagacggggacggggaaaacccacgcctatttattg
ccaattttgaatcggattgatccgggttctgatacggtacaggctgttatcacggcgccg
acgagagagcttgccaatcagattcatcaggaagcgctcaaaatcacacagggtgcggaa
gatgagccgatccggacaaaatgcttcatcggcgggacggacaagcaaaaatcaattgat
aagctgaaaacacagcctcatctcgtcgtcggaacgccgggccggatcgcggatctgatt
aaggcgcaggcattgaacgtctataaagcgcagtctctcgtcattgacgaagctgatctg
atgcttgacatgggctttttagaagacgttgattacatcggatcgcgtatgccggaagaa
ctgcagatgcttgtgttctcagctacgattccggaaaagctgaagccgtttttgaaaaag
tatatggaaaatccgaagtacgcgcatgttgagccgaaaagaatcacagccgaaaagatt
gaacatgttttggttccttctaaacagcgtgataaagacaaactgctttttgatatgatg
tctcatctgaatccttatctgggcattgtgtttgcaaatacgaaaaacacggctgaccat
attgcgaaatacctgactgaaaaaggaatgagggtcggtcttctgcacgggggattaacg
ccgcgtgagcgtaagaaggtaatgaagcagattaatgatctggagttcacttatgtcatt
gcgacagaccttgcggctagaggaattgacattaaaggcgtaagccacgtcatcaactac
gagcttccggacgatttggatttttatgttcaccgtgtcggaagaactgcacgcgccggt
tcatcaggccaagcactgaccatttatgagctttctgacgaagatgcgctcgcaagactt
gaaaagatgggcattgtgtttgactatgcggagcttgtaaacggggaatggaagaaaggc
gatgaccgccaccgccgtaaaaatcgcaaaaagacggcaaatgaggctgaccaaattgcg
aaacgcctcgtaaaaaagccgaaaaaagtaaagccgggctataaaaagaaaatgagctac
gaaatggaaaaaattaaaaagaagcagagaagaaaccaatctaacagaggaaagtag
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