Bacillus velezensis AS43.3: B938_12780
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Entry
B938_12780 CDS
T02382
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bamp
Bacillus velezensis AS43.3
Pathway
bamp03410
Base excision repair
bamp03430
Mismatch repair
bamp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bamp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B938_12780
03430 Mismatch repair
B938_12780
03440 Homologous recombination
B938_12780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bamp03400
]
B938_12780
DNA repair and recombination proteins [BR:
bamp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
B938_12780
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B938_12780
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B938_12780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
PGM_PMM_II
Metal_resist
Motif
Other DBs
NCBI-ProteinID:
AFZ91568
LinkDB
All DBs
Position
complement(2648122..2650482)
Genome browser
AA seq
786 aa
AA seq
DB search
MLASKMRWEIQQPDQEKVKSLTEQLDITPLVASLLVKRGFDTAESARLFLHTKDADFYDP
YELKGMREAVDRIKLAVSQGEPIMIYGDYDADGVTSTSVMLTALRQLSADVDFYIPDRFT
EGYGPNEQAFRSIKERGFSLIITVDTGIAAVHEAEVAKELGLDVIITDHHEPGPELPDVF
AIIHPKQPGCGYPFKELAGVGVAFKLAHALTGSLPEAMLDLAAIGTVADLVPLHDENRLI
ASLGIERLRTTNRPGLKALIKLSGGDIGQADEETIGFQVAPRLNAVGRIEQADPAVHLLM
TEDQFEAEELASDIDRLNKERQKMVKTMTEEAVEMVQQQGGNPSAIVVAKAGWNPGVVGI
VASKLAERFYRPAVVLGIDEEQGIAKGSARSIRGFNLFTSLSQCRDILPHFGGHPMAAGM
TLKAEDVAELRDRLNQMAEETLTEEDFIPVQEVDLVCGVEDITVESITELNMLSPFGMLN
PKPHVMVKNAVLDDVRLIGANKNHVKMTVKSDSAVLDCVGFNKGELEAGIVPGSTISIVG
EMSINEWNNRKKPQLMIKDAAVPEWQLFDIRGKRTWEDTVTALPKEKRVLISFNEKTAQK
LRAKELSGELAGITSESEAEALQLDGKYAVFLDVPPSADRLQHLLDGKKPERIYFVFINH
EEHFLSSFPSRNDFKWFYAFLLKRGAFDFGKHGSELARHRGWSIDTINFMTKVFFDLGFV
KIEDGVLSVVSGAKKRDLADSQTYQVKQQLMELDQKLNYSAAHELKEWLNKLMNQGSEAY
ESTRRT
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgtcaaaaatgcgctgggaaatccagcagccggatcaggaaaaagtcaaatca
ctcacagaacaattggacataacacctcttgtggcatcactgcttgtaaaaagaggtttt
gatactgccgaaagcgcaaggctgtttttacatacaaaggatgcagacttttatgacccg
tatgaattaaagggaatgcgggaagcagttgatcggataaaactggcggtttctcaaggg
gaaccgattatgatttacggagattacgatgcagacggcgttacaagcacgtcggtgatg
ctgacggcactcagacagctgtcggcggacgttgacttttatattcccgaccgtttcaca
gaaggctacggcccgaatgaacaagctttccgctccataaaagagcggggattttcgctg
atcattacagtggatacgggaatcgccgccgtccatgaagctgaagttgcaaaagagctg
ggcttagacgtcattattaccgaccaccatgagccgggacccgagcttcctgacgtattt
gcgatcatccacccgaagcagccgggctgcggctatccgtttaaagaattggccggcgtc
ggtgtggcgtttaagcttgcccacgcgcttacgggttctttgccggaagctatgctggac
ttggcggcaatcggtacggttgcagatctggtgcctcttcatgatgaaaacagattaatt
gcgtcactcggaatcgaaaggcttcggacgacaaatcggccgggcctcaaagccctgatt
aagctttccggcggagatatcggacaagctgatgaggaaacgatcggatttcaggtcgcg
ccaaggctcaatgccgtcggaagaatagaacaggccgatcccgccgtccatctgctgatg
accgaagatcagtttgaagcggaggaactggcttcggatattgaccggctgaataaagag
cggcagaaaatggtgaaaaccatgaccgaagaggctgttgaaatggttcagcagcaaggc
ggaaacccgtctgccattgtagtggcaaaagccggctggaacccgggagtcgtcggtatt
gtcgcatcgaagctggctgaacgtttttaccggcccgctgttgtgcttgggatagatgag
gagcagggaatcgctaaagggtcggcgcgaagcatcagaggcttcaacctgtttacgagc
ctttcacagtgcagagacattcttcctcatttcggcgggcatccgatggcggcaggaatg
acgttgaaggctgaagatgtggcggaattaagggacaggctgaatcaaatggctgaagaa
acccttacggaagaggattttattcccgttcaggaggttgatcttgtctgcggcgttgaa
gacataaccgttgaaagcattacagaattaaatatgctgtcgccgttcggcatgcttaac
cctaaaccgcatgtgatggtgaaaaatgcggtacttgatgatgtgcgcctgatcggagcg
aataaaaaccacgtgaaaatgacggtgaaaagtgattccgccgtccttgactgcgtcggc
tttaacaaaggagagcttgaagccggaattgtccccggatcaacgatttccattgtcggc
gagatgtccattaatgaatggaacaacagaaagaagccccagctgatgattaaagatgct
gcggtgccggaatggcagctttttgatatcaggggcaagcggacgtgggaagacacggtc
accgcgctgccgaaggaaaaacgggtgctcatcagctttaacgaaaaaaccgctcagaag
ctccgtgcaaaagagctgtcgggcgagctggccgggatcacatcggaatccgaggcggaa
gctctccagcttgacggaaaatatgccgtttttctggatgtgccgccgtcagcggatcgc
ctgcagcatttgcttgacggaaagaagccggaacggatttattttgtttttatcaatcat
gaagaacatttcctgtcctcatttccatcgcggaatgatttcaagtggttttacgcattt
ctcttgaaaaggggcgcttttgacttcggcaagcatggttcagagcttgcgagacacaga
ggatggtcaattgacacaatcaatttcatgacaaaggtgttttttgatctcggttttgtt
aaaatagaagatggtgtgctgtctgtcgtgagcggcgcgaaaaaacgcgacctggcagat
tcgcaaacctatcaggtaaaacagcagctgatggaattagaccagaagctcaattattcc
gcagcccatgagctgaaggaatggctgaataagctgatgaaccaaggttcagaagcttat
gaaagtacgaggaggacatag
DBGET
integrated database retrieval system
