Bacillus velezensis AS43.3: B938_13510
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Entry
B938_13510 CDS
T02382
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bamp
Bacillus velezensis AS43.3
Pathway
bamp03030
DNA replication
bamp03410
Base excision repair
bamp03420
Nucleotide excision repair
bamp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bamp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B938_13510
03410 Base excision repair
B938_13510
03420 Nucleotide excision repair
B938_13510
03440 Homologous recombination
B938_13510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bamp03032
]
B938_13510
03400 DNA repair and recombination proteins [BR:
bamp03400
]
B938_13510
Enzymes [BR:
bamp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B938_13510
DNA replication proteins [BR:
bamp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
B938_13510
DNA repair and recombination proteins [BR:
bamp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
B938_13510
NER (nucleotide excision repair)
GGR (global genome repair) factors
B938_13510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
UBA_3
HHH
F420_ligase
Motif
Other DBs
NCBI-ProteinID:
AFZ91712
LinkDB
All DBs
Position
complement(2789585..2792224)
Genome browser
AA seq
879 aa
AA seq
DB search
MTERKKLVLVDGNSLAYRAFFALPLLSNEKGIHTNAVYGFAMILMKMLEDEKPTHMLVAF
DAGKTTFRHSTFKEYKGGRQKTPPELSEQMPFIRELLDAYKISRYELPEYEADDIIGTLA
VSAEKEGFEVKVVSGDKDLTQLATGKTTVAITRKGITDVEDYTPEHVQEKYGLTPLQIID
MKGLMGDSSDNIPGVPGVGEKTAIKLLKQFHSVEKLLDSIDEVSGKKLKEKLEEYKEQAL
MSKELATIMTNAPIEVKPEDLDYQGFDREQVVAIFKDLGFNTLLERLGEESGETAEENFE
DINVETAEEITEDMLVSPSALVVEQIGDNYHEEPILGFSIVNETGLYYIPKEIAIQSEAF
KSWAEDESMKKWVFDSKRSVVALRWQGIELKGTEFDALLAAYIINPGNSYDDVASVAKEY
GLNIVSKDEAVYGKGAKRAVPAEKELADHLARKASAVNSLRDKLLDALEENNQLELYEDL
ELPLALILGEMESMGVKVDVERLKRMGEELKAKLKEYEEKIHDIAGEPFNINSPKQLGVI
LFEKLGLPPVKKTKTGYSTSADVLEKLADKHDIVAHILQYRQIGKLQSTYIEGLLKVTRE
DSHKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSEPDWLIFAADYSQI
ELRVLAHISKDENLIEAFTNDMDIHTKTAMDVFHVSEDEVTQAMRRQAKAVNFGIVYGIS
DYGLSQNLGITRKEAGAFIDRYLESFPGVKAYMEESVQEAKQKGYVTTLMQRRRYIPELT
SRNFNLRSFAERTAMNTPIQGSAADIIKKAMIDMAAELKEKNLKARLLLQVHDELIFEAP
KEEIEILEKLVPEVMEHALALDVPLKADYASGPSWYDAK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacgaaaaaaattagtgcttgtcgacggaaacagtctggcgtatcgggcgttt
tttgcattgccgcttttaagcaatgaaaaaggcatccatacaaatgccgtatacgggttt
gcgatgattttaatgaaaatgctggaagatgaaaagccgacccacatgctggtggctttt
gatgcgggaaaaaccactttccgccacagcacgtttaaagaatataaaggcggaagacaa
aaaacgccgccggagctttcagaacagatgccgttcatccgcgagctccttgatgcctac
aaaatcagccgctacgagcttcctgaatatgaagcggacgatattatcggcacccttgcc
gtatctgctgaaaaagaaggcttcgaagtaaaggtagtgtcgggggacaaggacttaacc
cagcttgcaaccgggaaaacgaccgttgccattacgagaaaaggcattaccgacgtggaa
gattacacgccggagcacgtgcaagaaaagtacggtctgacccctttgcaaatcattgat
atgaagggattaatgggggattcatccgataacataccgggcgtccccggcgtcggagaa
aaaaccgcgattaagcttttaaagcagttccattcggttgaaaaactgcttgattccatt
gatgaagtcagcggaaaaaaattaaaagaaaagcttgaagaatataaggaacaagccctg
atgagcaaagagctggcgacgattatgacaaatgcgccgattgaagtcaagcccgaagat
ttagattaccaagggtttgaccgtgaacaagttgttgccatttttaaagacctcggtttt
aatacgcttcttgagcggctcggtgaagaaagcggcgaaacggcggaagaaaattttgaa
gacatcaatgttgaaacggcagaagaaatcactgaagatatgctcgtttcgccgtccgct
ttggtcgttgaacaaatcggtgataactatcacgaagaaccgatcctcggcttttccatc
gtgaatgaaacaggtctttattatattccgaaagaaatcgccattcagtctgaagctttt
aaatcttgggctgaagatgaatcgatgaaaaagtgggtgttcgacagcaaacgttccgtc
gtcgctttgcgctggcagggaattgagctgaagggaacggaatttgacgcgcttcttgct
gcctacattataaacccgggcaattcgtacgacgatgtcgcgagcgtagcgaaagaatac
gggctgaatatcgtttcaaaagatgaagcggtatacggaaaaggcgcaaagcgcgccgtt
ccggctgaaaaagagcttgccgatcatctcgcgcggaaagcgtctgccgttaacagcctc
cgtgacaaactgcttgacgctttggaagaaaataatcagcttgagttatatgaagatctc
gaactcccgcttgcgctaattctcggagaaatggaatcaatgggcgtcaaagtggatgtt
gaaagactgaagcgaatgggcgaagagctcaaggcaaagctgaaagaatatgaagaaaaa
atccatgacatcgccggtgagccgtttaacatcaattcaccaaaacagctcggcgtcatt
ctgtttgaaaagctcggcctgccgccagtaaagaaaacaaagacaggctattccacttca
gccgatgtgcttgagaagctcgcagacaaacatgatatcgtcgcgcacattctgcaatac
agacaaatcggcaaactccaatcgacttatattgaagggctgctgaaggtcacgcgcgag
gattctcataaggtgcatacaagattcaatcaggcattgactcaaaccggacgcctcagc
tcaacggatccgaacctgcaaaatattccgatccggctggaggaagggcggaaaatccgt
caggctttcgtaccgtccgaaccggactggcttattttcgccgccgattattcacaaatt
gaattaagggtgcttgcgcatatttcaaaagatgaaaatctgatcgaagcgtttacgaat
gacatggacattcacacaaaaaccgccatggacgtgtttcatgtcagtgaagatgaagtg
acacaagcgatgcgccgccaggcaaaggccgtcaatttcggcatcgtttacggcatcagt
gattacgggctgtcgcaaaacctcggcatcacccggaaagaagcgggcgcttttattgac
cgctatttggagagcttcccgggcgttaaggcgtatatggaagaatcggtgcaggaagcg
aagcaaaaaggatatgtcacgacccttatgcagcgccgccgctatattcctgagctgacc
agccgcaacttcaacctgcggagctttgcggaacggacggccatgaatacgccgattcag
ggaagcgccgccgatattattaaaaaagccatgattgacatggcagctgagctgaaagaa
aaaaacctgaaggcgcgactgctgcttcaggtgcacgatgaattgatttttgaagcgcct
aaggaagaaattgaaatattagagaagctggttcctgaagtgatggagcatgctttggca
ttagacgtgccgctgaaggcggattatgcttcagggccgtcttggtacgatgcaaaataa
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