Bacillus velezensis TrigoCor1448: AJ82_06075
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Entry
AJ82_06075 CDS
T03161
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bamt
Bacillus velezensis TrigoCor1448
Brite
KEGG Orthology (KO) [BR:
bamt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bamt03400
]
AJ82_06075
DNA repair and recombination proteins [BR:
bamt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AJ82_06075
Archaeal homologous recombinant proteins
AJ82_06075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AHK48632
LinkDB
All DBs
Position
1085564..1088956
Genome browser
AA seq
1130 aa
AA seq
DB search
MKPILLTIKGLHSFREEQTIDFAGLSGAGVFGIFGPTGSGKSSILDAMTLALYGKVERAA
NNTHGILNHAEDQLAVSFTFALQSGHRVSYKVERVFKRTDETKVKTALCRLIEIKDEQTV
LADKANEVNKKVEELLGLTIDDFTRAVVLPQGKFAEFLSLKGAERRHMLQRLFNLEQYGD
RLVKKLRRRAQEAAAKKNEMLAEQSGLGDAGEDALKQAEQQFHEANERLEAAEKKRVRAK
ERFENHQEIWNLQTERDEYERREKKLEERRPYITDLTERLKEAETALALEPYADRYTEAV
RRKQHAEREHELAKRKSEAETVSFTRQNEAYEAWRAHKAEQEPKLVKEEELYQRLSAIEQ
KLLEAKKEAEKTNAEHSKKEEEYEAASKQLAGVKDRLTRGQNRQNELKEELKAVQVTADE
RKKCQTAAQLAAGFQQTQEQITKEQANLTTQLKNMEKLNGESESLTAKAKTEEEDITRAY
QTLQTVYHMVCETERSLKAAAERADKTQADLRRRSEEARTAALTKELSEKLIEGKPCPVC
GSTQHDRPRSAQETFSPDTAVQEQLQQVEALLSEAAALSQEVLTAKVALEEQSGRFTEEC
PFLQSVRVPELEAASSISGRPLDEAFSAVRLEWKQMKQDMLSVKEKVTRLISAHQQTVKQ
AEQLAERIRYEEKEAGRLRHSLEELESLSESRLNQYNEVCGDIPPNQIDAWQASIDEKDR
QAEECEKRIETSIAFLKEHEEEKERLQEMKHRLERERLELHYASERLQQVIDGYEQELGT
AAEETSISAKLEAVRQELQLLKSKEQSLFDALKQAQQSLNDAKGRESGSLMSLRDAETSL
EKAQNDWRVRSKDTGFTEPDQVKKSLLPQGRAEEMKKEIDEFLDTSKQLSANISRVTDKL
AERRISEEEWTASVSLLKQAEAESGAAMEEKGAQAKAFAVMQKQHKRFKEIEAELKSWQT
QIDRLDKLQSVCKGNTFVEFLAEEQLESVARDASARLGALTRQRYAILVDSEGGFVMRDD
ANGGVKRPVSSLSGGETFLTSLSLALALSAQIQLRGQYPLQFFFLDEGFGTLDQGLLDTV
VTALEKLQSDNLSVGVISHVQELRARLPKKLIVHPSEPGGKGTRVTLEIM
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgattctgttaacgataaaagggctccacagcttcagggaggaacagaccatt
gattttgccgggctgtccggagcgggggtgttcggaattttcgggccgaccggaagcgga
aaatcatcaatccttgatgccatgacactcgctttatacggaaaagtggagcgcgccgca
aataatacgcacggcatcctgaatcatgccgaagatcagctcgcggtctcatttacattc
gcgcttcaatccggccaccgggtttcctacaaggtcgagcgcgtttttaagagaacggat
gaaacgaaagtaaaaaccgccctctgccgcctgattgaaatcaaagacgaacaaacggtg
ctggccgataaagcgaatgaagtgaacaaaaaggtggaagagcttcttggcctgaccatt
gacgactttacaagagccgtcgtgctgccgcaaggaaagtttgccgagtttctgtcgctt
aaaggcgcggaaagaagacatatgctccagcgcctgtttaatctggaacagtacggggac
aggcttgtcaaaaaattgcggcggcgggcgcaggaagcggcagcgaaaaaaaatgaaatg
ctggccgaacaatccggcctcggagacgcaggagaagatgcgctgaagcaggctgaacag
cagtttcacgaagcgaacgaacggcttgaagcagctgagaagaaacgggtccgggcaaaa
gagcgttttgagaatcaccaggaaatttggaacctgcagacagaaagagatgaatatgag
cgccgggagaaaaagcttgaggaaagacgcccgtacatcacggatttgactgagcgtctt
aaagaggcggaaacagctctcgcccttgagccgtacgcagaccgttacacagaagccgtc
cgccggaagcagcacgctgaacgggaacacgaactggccaaacggaaatcagaggcggaa
accgtttcatttacccggcaaaatgaagcctatgaagcatggcgggcccataaggccgaa
caggagccgaagcttgtcaaggaagaagagctgtatcaaagactttcagccattgaacaa
aaactgcttgaagcgaaaaaagaagcggaaaaaacaaatgcggaacacagcaaaaaagag
gaagaatacgaagccgcctcgaaacagctggccggagtgaaagaccgcctgacccgcggc
caaaacaggcagaatgagctgaaagaagagctgaaagcagttcaagtgaccgccgatgaa
cggaaaaaatgccagactgcagcacagctggcggcgggctttcagcagacacaggaacaa
atcacgaaagaacaggccaatctgacaacgcagctgaaaaacatggagaagctgaacgga
gaaagcgagtcgctcacagcgaaagcgaaaacggaagaggaagatattacgcgcgcttat
caaacgcttcaaaccgtttaccatatggtctgtgaaacggaacgttcactgaaagccgca
gccgaacgggctgacaaaacgcaagccgatctccgcaggcgctcagaggaagcgagaacg
gctgcattaacaaaagaattatcggaaaaactaatcgaaggaaagccttgtcctgtatgc
ggctcgacgcagcatgaccgcccgcgttccgctcaggaaacattctcgcctgatacggct
gtacaggaacagttgcagcaggttgaagcgctgctttctgaggcggcggctctttctcag
gaggtgctgacagccaaggttgcattagaagagcagtcggggcgttttaccgaagaatgt
ccgtttctgcaaagcgtccgggttccggagctggaagccgcttcctccatcagcggacgc
ccgcttgatgaagcgttcagcgccgtccgcttggaatggaaacaaatgaaacaggatatg
ctgtcggtaaaagagaaggtcacaagactgatcagcgcgcatcagcagacggtgaaacaa
gctgagcagcttgccgaacgaatccgctacgaggaaaaagaagccggccgtctcagacat
tcattagaagagcttgaatcgctgtcagaaagccgattgaatcagtacaacgaagtctgc
ggtgatattccgccaaaccagattgacgcctggcaggcttcgatagatgagaaggacagg
caggcagaagaatgtgagaagcgcattgaaacaagcatcgcattcctcaaggaacatgaa
gaggagaaagaacgcctgcaggagatgaagcatcggcttgaacgggaacggctcgagctt
cactatgcgtctgagcgcctgcagcaggtgattgacggatatgaacaagagctcggaaca
gcagctgaagaaacatcaatttccgcaaagcttgaagcggtgcggcaggaattacagctg
ttaaaatcgaaagaacagtccctattcgatgcgctgaagcaggcgcagcaatcactgaat
gacgcaaaaggccgggaatccgggagtctcatgtcactcagggatgctgagacctccctt
gagaaagcgcaaaacgactggcgcgtgaggtcaaaagacaccgggtttaccgagccggac
caagtcaaaaaaagtctgcttccgcaagggcgtgcagaggaaatgaaaaaagaaattgat
gagttcctggacacctcaaaacagctatcggcaaatatcagccgtgttactgataaatta
gccgagcgccggatatcggaggaagaatggacagcatccgtttctctgctgaagcaggca
gaggctgagtcaggcgccgccatggaggaaaaaggagcacaggcaaaagctttcgcggtt
atgcaaaaacagcataagcgctttaaagagattgaggccgaactgaaaagctggcagaca
cagattgacaggcttgataagctccagtctgtatgtaaaggcaatacattcgtcgaattt
ttagcggaagaacagctggaaagcgtggctcgagacgcctctgcccgtctcggagcgctg
acaaggcagcggtatgccatattagtcgattcagaaggcggtttcgtcatgcgtgatgac
gcgaacggaggcgtcaaacggcccgtatcaagcctttccggcggggagacgtttctgaca
tcgctgtcgcttgcgcttgccttgtccgcccagattcagctgcgggggcaatacccgctg
caattctttttcttagatgaaggattcgggactcttgaccaagggctcttagacaccgtt
gtcacagcgctcgaaaagctgcaatcggacaacttatccgtcggagtgatcagccatgtg
caggagctgagagcgcgtctgccgaaaaaattaatcgttcatccgtccgaaccgggcggg
aaaggcacccgggtcacattggagatcatgtag
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integrated database retrieval system
