Bacillus velezensis TrigoCor1448: AJ82_07090
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Entry
AJ82_07090 CDS
T03161
Name
(GenBank) positive control sigma-like factor
KO
K24072
positive control factor
Organism
bamt
Bacillus velezensis TrigoCor1448
Brite
KEGG Orthology (KO) [BR:
bamt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bamt03021
]
AJ82_07090
Transcription machinery [BR:
bamt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AJ82_07090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
HTH_38
HTH_23
GerE
HTH_36
PhyR_sigma-like
UPF0122
HTH_29
Fe_dep_repress
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AHK48804
LinkDB
All DBs
Position
1245901..1246413
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AA seq
170 aa
AA seq
DB search
MEDLLFEYKRTLKETKKWYKQLEEADETVLTSEELKDKKIIRTIITDVEYVIEWLEKGRQ
PGIRRAIDRRDAYQRMLIKDPRIIETYSQALMFEPSGNVTEEDRIRLRDALAVLTDREKE
MLLLHKAECFSYERIAALLNVKKSTVQTTVKRALLKIQKQQEQRNQSPAS
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggaagacttactatttgaatataaacgcacgctgaaagagacgaaaaagtggtacaag
cagctggaggaagccgatgaaacggtgcttacttcagaagaactgaaagataaaaaaatc
atcagaacgatcattacagatgtggaatatgtcatcgaatggcttgaaaaaggccggcag
cccggcataagaagagcgatagaccgcagagacgcttatcagagaatgctgattaaagat
ccgagaatcatagaaacctattcgcaggcgctgatgtttgaaccttccgggaatgtgact
gaagaagacagaatcagactgcgggacgcattagctgttttaacggatagagaaaaagaa
atgctgctgctccacaaagcggaatgcttttcatatgaacggattgccgccttgctgaat
gtaaagaaatcaaccgtacagacgacggtcaaacgggcgcttctgaaaattcaaaaacag
caggaacaaagaaatcaatcgcctgcttcataa
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