Bacillus velezensis TrigoCor1448: AJ82_13255
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Entry
AJ82_13255 CDS
T03161
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bamt
Bacillus velezensis TrigoCor1448
Brite
KEGG Orthology (KO) [BR:
bamt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bamt03019
]
AJ82_13255
03009 Ribosome biogenesis [BR:
bamt03009
]
AJ82_13255
Enzymes [BR:
bamt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AJ82_13255
Messenger RNA biogenesis [BR:
bamt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AJ82_13255
Ribosome biogenesis [BR:
bamt03009
]
Prokaryotic type
rRNA helicases
AJ82_13255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHK49869
LinkDB
All DBs
Position
complement(2501393..2502709)
Genome browser
AA seq
438 aa
AA seq
DB search
MKETKFDGYNLKPFIIDAVHRLGFYEPTDIQKRLIPAVLKNESVIGQSQTGTGKTHAYLL
PILNRIDPGSDTVQAVITAPTRELANQIHQEALKITQGAEDEPIRTKCFIGGTDKQKSID
KLKTQPHLVVGTPGRIADLIKAQALNVYKAQSLVIDEADLMLDMGFLEDVDYIGSRMPEE
LQMLVFSATIPEKLKPFLKKYMENPKYAHVEPKRITAEKIEHVLVPSKQRDKDKLLFDMM
SHLNPYLGIVFANTKNTADHIAKYLTEKGMRVGLLHGGLTPRERKKVMKQINDLEFTYVI
ATDLAARGIDIKGVSHVINYELPDDLDFYVHRVGRTARAGSSGQALTIYELSDEDALARL
EKMGIVFDYAELVNGEWKKGDDRHRRKNRKKTANEADQIAKRLVKKPKKVKPGYKKKMSY
EMEKIKKKQRRNQSNRGK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaactaaatttgatggatacaacttaaaaccgtttattatagatgcagttcac
cgccttggtttttatgaaccgacagatattcaaaagcgtctgatacctgccgtactgaaa
aacgaaagcgtgatcgggcagtcccagacggggacggggaaaacccacgcctatttattg
ccaattttgaatcggattgatccgggttctgatacggtacaggccgttatcacggcgccg
acgagagagcttgccaatcagattcatcaggaagcgctcaaaatcacacagggtgcggaa
gatgagccgatccggacaaaatgcttcatcggcgggacggacaagcaaaaatcaattgat
aagctgaaaacacagcctcatctcgtcgtcggaacgccgggccggatcgcggatctgatt
aaggcgcaggcattgaacgtctataaagcgcagtctctcgtcattgacgaagctgatctg
atgcttgatatgggctttttagaagacgttgattatatcggatcgcgtatgccggaagaa
ctgcagatgcttgtgttctcagctacgattccggaaaagctgaagccgtttttgaaaaag
tatatggaaaatccgaagtacgcgcatgttgagccgaaaagaatcacagccgaaaagatt
gaacatgtgttggttccttctaaacagcgtgataaagacaaactgctttttgatatgatg
tctcatctgaatccttatctgggcattgtgtttgcaaatacgaaaaacacggctgaccat
attgcgaaatacctgactgaaaaaggaatgagggtcggtcttctgcacgggggattaacg
ccgcgtgagcgcaaaaaggtaatgaagcagattaatgatctggaattcacttatgtcatt
gcgacagaccttgcggctagaggaattgacattaaaggcgtaagccacgtcatcaactac
gagcttccggacgatttggatttttatgttcaccgtgtcggaagaactgcacgcgccggt
tcatcaggccaagcactgaccatttatgagctttctgacgaagatgcgctcgcaagactt
gaaaagatgggcattgtgtttgactatgcggagcttgtaaacggggaatggaagaaaggc
gatgaccgccaccgccgtaaaaatcgcaaaaagacggcaaatgaggctgaccaaattgcg
aaacgcctcgtaaaaaagccgaaaaaagtaaagccgggctataaaaagaaaatgagctac
gaaatggaaaaaattaaaaagaagcagagaagaaaccaatctaacagaggaaagtag
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