Bacillus velezensis TrigoCor1448: AJ82_13975
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Entry
AJ82_13975 CDS
T03161
Name
(GenBank) recombinase RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bamt
Bacillus velezensis TrigoCor1448
Pathway
bamt03410
Base excision repair
bamt03430
Mismatch repair
bamt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bamt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AJ82_13975
03430 Mismatch repair
AJ82_13975
03440 Homologous recombination
AJ82_13975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bamt03400
]
AJ82_13975
DNA repair and recombination proteins [BR:
bamt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AJ82_13975
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AJ82_13975
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AJ82_13975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
PGM_PMM_II
Metal_resist
Motif
Other DBs
NCBI-ProteinID:
AHK49992
LinkDB
All DBs
Position
complement(2629781..2632141)
Genome browser
AA seq
786 aa
AA seq
DB search
MLASKMRWEIQQPDQEKVKSLTEQLDITPLVASLLVKRGFDTAESARLFLHTKDADFYDP
YELKGMREAVDRIKLAVSQGEPIMIYGDYDADGVTSTSVMLTALRQLSADVDFYIPDRFT
EGYGPNEQAFRSIKERGFSLIITVDTGIAAVHEAEVAKELGLDVIITDHHEPGPELPDVF
AIIHPKQPGCGYPFKELAGVGVAFKLAHALTGSLPEAMLDLAAIGTVADLVPLHDENRLI
ASLGIERLRTTNRPGLKALIKLSGGDIGQADEETIGFQVAPRLNAVGRIEQADPAVHLLM
TEDQFEAEELASDIDRLNKERQKMVKTMTEEAVEMVQQQGGNPSAIVVAKAGWNPGVVGI
VASKLAERFYRPAVVLGIDEEQGIAKGSARSIRGFNLFTSLSQCRDILPHFGGHPMAAGM
TLKAEDVAELRDRLNQMAEETLTEEDFIPVQEVDLVCGVEDITVESITELNMLSPFGMLN
PKPHVMVKNAVLDDVRLIGANKNHVKMTVKSDSAVLDCVGFNKGELEAGIVPGSTISIVG
EMSINEWNNRKKPQLMIKDAAVPEWQLFDIRGKRTWEDTVTALPKEKRVLISFNEKTAQK
LHAKELSGELAGITSESEAEALQLDGKYAVFLDVPPSADRLQHLLDGKKPERIYFVFINH
EEHFLSSFPSRNDFKWFYAFLLKRGAFDFGKHGSELARHRGWSIDTINFMTKVFFDLGFV
KIEDGVLSVVSGAKKRDLADSQTYQVKQQLMELDQKLNYSAAHELKEWLNKLMNQGSEAY
ESTRRT
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgtcaaaaatgcgctgggaaatccagcagccggatcaggaaaaagtcaaatca
ctcacagaacaattggacataacacctcttgtggcatcactgcttgtaaaaagaggtttt
gatactgccgaaagcgcaaggctgtttttacatacaaaggatgcagacttttatgacccg
tatgaattaaagggaatgcgggaagcagttgatcggataaaactggcggtttctcaaggg
gaaccgattatgatttacggagattacgatgcagacggcgttacaagcacgtcggtgatg
ctgacggcactgagacagctgtcggcggacgttgacttttatattcccgaccgtttcaca
gaaggctacggcccgaatgaacaagctttccgctccataaaagagcggggattttcgctg
atcattacagtggatacgggaatcgccgccgtccatgaagctgaagtcgcaaaagagctg
ggcttagacgtcattattaccgaccaccatgagccgggacccgagcttcctgacgtattt
gcgatcatccacccgaagcagccgggctgcggctatccgtttaaagaattggccggcgtc
ggtgtggcgtttaagcttgcccacgcgcttacgggttctttgccggaagctatgctggac
ttggcggcaatcggtacggttgcagatctggtgcctcttcatgatgaaaacagattaatt
gcgtcactcggaatcgaaaggcttcggacgacaaatcggccgggcctcaaagccctgatt
aagctttccggcggagatatcggacaagctgatgaggaaacgatcggatttcaggtcgcg
ccaaggctcaatgccgtcggaagaatagaacaggccgatcccgccgtccatctgctgatg
accgaagatcagtttgaagcggaggaactggcttcggatattgaccggctgaataaagag
cggcagaaaatggtgaaaaccatgaccgaagaggctgttgaaatggttcagcagcaaggc
ggaaacccgtctgccattgtagtggcaaaagccggctggaatccgggagtcgtcggtatt
gtcgcatcgaagctggctgaacgtttttaccggcccgctgttgtgcttgggatagatgag
gagcagggaatcgctaaagggtcggcgcgaagcatcagaggcttcaacctgtttacgagc
ctttcacagtgcagagacattcttcctcatttcggcgggcatccgatggcggcaggaatg
acgttgaaggctgaagatgtggcggaattaagggacaggctgaatcaaatggctgaagaa
acccttacggaagaggattttattcccgttcaggaggttgatcttgtctgcggcgttgaa
gacataaccgttgaaagcattacagaattaaatatgctgtcgccgttcggcatgcttaac
cctaaaccgcatgtgatggtgaaaaatgcggtgcttgatgatgtgcgcctgatcggagcg
aataaaaaccacgtgaaaatgacggtgaaaagtgattccgccgtccttgactgcgtcggc
tttaacaaaggagagcttgaagccggaattgtccccggatcaacgatttccattgtcggc
gagatgtccattaatgaatggaacaacagaaagaagccccagctgatgattaaagacgct
gcggtgccggaatggcagctttttgatatcaggggcaagcggacgtgggaagacacggtc
accgcgctgccgaaggaaaaacgggtgctcatcagctttaacgaaaaaaccgctcagaag
ctccatgcaaaagagctgtcgggcgagctggccggtatcacttcggaatccgaggcggaa
gctctccagcttgacggaaaatatgccgtttttctggatgtgccgccgtcagcggatcgc
ctgcagcatttgcttgacggaaagaagccggaacggatttattttgtttttatcaatcat
gaagaacatttcctgtcctcatttccatcgcggaatgatttcaagtggttttacgcattt
ctcttgaaaaggggcgcttttgacttcggcaagcatggttcagagcttgcgagacacaga
ggatggtcaattgacacaatcaatttcatgacaaaggtgttttttgatctcggttttgtt
aaaatagaagatggtgtgctgtctgtcgtgagcggcgcgaaaaaacgcgacctggcagat
tcgcaaacctatcaggtaaaacagcagctgatggaattagaccagaagctcaattattcc
gcagcccatgagctgaaggaatggctgaataagctgatgaaccaaggttcagaagcttat
gaaagtacgaggaggacatag
DBGET
integrated database retrieval system
