Bacillus velezensis TrigoCor1448: AJ82_17315
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Entry
AJ82_17315 CDS
T03161
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bamt
Bacillus velezensis TrigoCor1448
Pathway
bamt03420
Nucleotide excision repair
bamt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bamt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AJ82_17315
03430 Mismatch repair
AJ82_17315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bamt03400
]
AJ82_17315
Enzymes [BR:
bamt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AJ82_17315
DNA repair and recombination proteins [BR:
bamt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AJ82_17315
MMR (mismatch excision repair)
Other MMR factors
AJ82_17315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
Viral_helicase1
AAA_30
PhoH
SLFN-g3_helicase
nSTAND3
AAA_16
DEAD
NACHT
Motif
Other DBs
NCBI-ProteinID:
AHK50554
LinkDB
All DBs
Position
complement(3212177..3214492)
Genome browser
AA seq
771 aa
AA seq
DB search
MAKRDKEWKEEQERINFVMKELEQKQTHLEASSGGLKQDIVGLRKTFWDDVTVNMDDAHE
AAETFSSIKQQAEMLSERERTHRLQYRQLQKIQKLKTSPYFGRVDFTEKGESSSERIYIG
LTSLMDENNEQFLIYDWRAPISSLYYQYSPGKARYEVPEETIEGDITLKRQFIIKNGTLK
AMFNTDMTIGDEMLQEVLSGHSGQHMKNIVSTIQKEQNEIIRDEKSKYLIVQGAAGSGKT
SAALQRAAYLLYRGRGVLDARQIVLFSPNILFNSYVSAVLPELGEENMEQATFQEYIIRR
LGRKFDCESPYEQLEYCLTEQNQDALSVRLAAIAYKASSAFQAMIDRYACSLSGSGLMCK
QISFRGDILISKERIEAYFYSLDQQLPIPNRAELTAEWLLAEISALEKKERKKEWVLQES
ELLDKEDYAEVYQTLKKQAADDEPAFDDHQREQRLLGAIIVGKAFKPIKQAVRRLGFLDI
KRMYLRLFSDWGADEKPDHWESIGALTRNAFAERSLPYEDAAPYLYLQDLLEGKRKNTQM
KHVFIDEAQDYSPFQLTYIQSIFPAAKMTVLGDVSQSIYAHTITGPSSLAGCFRNGAEKY
VSLKRTYRSTRQIVEFTKALLADGDDIEPFNRNGEKPRVLRTDTENARQEQLADTIRELR
QKGWETVAVICKTAAEAKKVFQAVSAESGVRLINKENQPFQKGVCVIPVYLAKGIEFDAV
IAADASAAQYKSEHDRKLLYTACTRAMHHLTVLSPGEHSPFIKEVPAGLFV
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgtgataaagagtggaaagaagagcaggaaagaatcaattttgtcatgaag
gaactggaacagaaacaaactcatcttgaagcctcatcgggcggattgaagcaggatatt
gtcgggctgagaaaaacgttttgggatgatgtcaccgtgaatatggatgacgcccacgaa
gcggctgagacattttcaagcattaaacagcaggcagaaatgctttcagaacgtgaacgg
acgcatcggcttcaataccggcagcttcaaaaaatccaaaagctgaaaacctctccttac
ttcggccgtgtcgattttacggaaaaaggggagtcctcttccgagcggatttatatcggg
ctgacttctttgatggatgaaaacaacgagcaatttctcatttatgattggcgcgctccc
atctcctctctttactatcaatattccccgggaaaagcccgctatgaagttcccgaagaa
acgatagaaggagacatcacactgaagcggcagtttatcattaaaaacgggacgcttaaa
gcgatgtttaacacggatatgacgattggtgacgaaatgctgcaagaggtgctgagcggg
cattccggacagcatatgaaaaacatcgtgtcaaccatccaaaaagaacagaacgaaatc
atccgggatgaaaaaagcaaatatctcatcgttcagggagccgccggaagcgggaaaaca
tccgcggcgcttcagcgggccgcttacttgctgtaccgcggtcgcggggtgcttgatgcc
cgtcagattgtattgttttccccgaacattttgttcaacagttatgtgtccgccgtattg
ccggaattgggagaagagaatatggagcaggccacctttcaggaatatatcatccgccgg
ctcggacgaaagtttgattgtgaaagcccgtacgagcagcttgaatattgcctgactgaa
caaaatcaggacgcactttccgtaaggctcgcagccattgcttacaaagcgtcatcagct
ttccaggccatgattgaccgctacgcctgctcgctttccggctcgggcctgatgtgtaaa
cagatcagcttccggggagacatcctgatttcaaaagaacggattgaagcctatttttat
tcgcttgatcagcagctgccgattccgaacagagcggagctgacagcggaatggcttctc
gcggaaatcagcgctctcgaaaaaaaggagcgtaagaaggaatgggtcttgcaggagagc
gagctgcttgataaggaagactatgctgaggtttatcaaacactcaagaagcaggcggca
gatgatgaacctgcatttgacgaccatcagcgcgaacagcggctgcttggcgccattatt
gtcggcaaagcctttaaaccgattaagcaggccgtcagacggctcggctttctcgatata
aaacggatgtatctccggctgttttcagactggggagctgatgaaaagcccgatcattgg
gagagcatcggcgctttgaccagaaacgcatttgcagaacggtcacttccgtatgaagat
gccgctccgtatctgtatttgcaggatctgttagaaggaaaaagaaaaaacacacaaatg
aagcacgtcttcattgatgaagcgcaggattattccccatttcagctcacgtatattcaa
agcatcttcccagcggcaaagatgacggtgctcggtgatgtcagccagtcgatttatgcc
cacaccattacgggcccttcttccctcgccggctgctttcgcaatggtgcagaaaagtat
gtcagcctgaagcggacttacagatcgacgcggcagattgttgaatttacgaaagcgctg
ctggctgacggcgatgacattgagccttttaaccggaacggggaaaaaccgcgtgttttg
cggacggatacagaaaatgcgcggcaggaacaattggcggatacaatccgggagctcaga
caaaaaggctgggagacggtcgccgtcatctgcaaaacggccgcggaagccaaaaaagtg
tttcaggcggtcagcgccgagagcggtgtccgcttgatcaataaagaaaaccagcctttt
caaaaaggggtatgcgtcattcccgtttatttggcaaaaggcattgagtttgacgccgtc
attgccgctgatgcctctgctgcccagtacaaaagcgaacatgaccgtaagctgttatat
acggcctgtacgcgggcgatgcatcatctgaccgtattgtctccgggagaacactctcct
tttattaaagaagtgcccgccggcttattcgtgtaa
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