Bacillus velezensis SQR9: V529_10240
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Entry
V529_10240 CDS
T03384
Symbol
yirY
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
bamy
Bacillus velezensis SQR9
Brite
KEGG Orthology (KO) [BR:
bamy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bamy03400
]
V529_10240 (yirY)
DNA repair and recombination proteins [BR:
bamy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
V529_10240 (yirY)
Archaeal homologous recombinant proteins
V529_10240 (yirY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AHZ15050
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All DBs
Position
1098318..1101710
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AA seq
1130 aa
AA seq
DB search
MKPILLTIKGLHSFREEQTIDFAGLSGAGVFGIFGPTGSGKSSILDAMTLALYGKVERAA
NNTHGILNHAEDQLAVSFTFALQSGHRVSYKVERVFKRTDETKVKTALCRLIEIKDEQTV
LADKANEVNKKVEELLGLTIDDFTRAVVLPQGKFAEFLSLKGAERRHMLQRLFNLEQYGD
RLVKKLRRRAQEAAAKKNEMLAEQSGLGDAGEDALKQAEQQFHEANERLEAAEKKRVRAK
ERFENHQEIWNLQTERDEYERREKKLEERRPYITDLTERLKEAETALALEPYADRYTEAV
RRKQRTEQEHELAKRKSEAETVSFTRQNEAYEAWRAHKAEQEPKLVKEEELYQRLSAIEQ
KLLEAKKEAEKTNAEHSKKEEEYEAASKQLAAVKDRLTRGQNRQNELKEELKAVQVTADE
RKKCQTAAQLAAGFQQTQEQITKERANLTTQLKNMEKLNGESESLTAKAKTEEEDITRAY
QTLQTVYHMVCETERSLKAAAERADKTQADLRRRSEEARTAALTKELSEKLIEGKPCPVC
GSTQHDRPRSAHETFSPDTAVQEQLQQVEALLSEAAALSQEVLTAKVALEEQSGRFTEEC
PFLQSARVPELEAASSISGRPLDETFSAVRLEWKQMKQDMLSVKEKVTRLISAHQQTVRQ
AEQLAERIRYEEKEADRLRHSLEELESLSESRLNQYNEVCGDIPPNRIDAWQASIDEKDR
QAEECEKRIETSIAFLKEHEEEKERLQEMKHRLERERLELHYASERLQQVIDGYEQELGT
AAEETSISAKLEAVRQELQLLKSKEQSLFDSLKQAQQSLNDAKGRESGSLMSLRDAETSL
EKAQNDWRVRSKDTGFADPDQVKKSLLPQGRAEEMKKEIDEFLDTSKQLSANISRVTDKL
AERRISEEEWTASVSLLKQAEAESGAAMEEKGAQAKAFAVMQKQHKRFKEIEAELKSWQT
QIDRLDKLQSVCKGNTFVEFLAEEQLESVARDASARLGALTRQRYAILVDSEGGFVMRDD
ANGGVKRPVSSLSGGETFLTSLSLALALSAQIQLRGQYPLQFFFLDEGFGTLDQGLLDTV
VTALEKLQSDNLSVGVISHVQELRARLPKKLIVHPSEPGGKGTRVTLEIM
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgattctgttaacgataaaagggctccacagtttcagggaggaacagaccatt
gattttgccggactgtcaggagccggggtgttcgggattttcggaccgaccggaagcgga
aaatcgtcgatccttgacgccatgacactcgctttatacggaaaagtggagcgcgccgca
aataatacgcacggcatcctgaatcatgccgaagatcagctcgccgtctcatttacattc
gcgcttcaatccggccaccgggtttcctacaaggtcgagcgcgtttttaagagaacggat
gaaacgaaagtaaaaaccgccctctgccgcctgattgaaatcaaagacgaacaaacggtg
ctggccgataaagcgaatgaagtgaacaaaaaggtagaggagcttcttggcctgaccatt
gacgactttacaagagccgtcgtgctgccgcaaggaaagtttgccgagtttctgtcgctt
aaaggcgcggaaagaagacatatgctccagcgcctgtttaatctggaacagtacggggac
aggcttgtcaaaaaattgcggcggcgggcgcaggaagcggcagcgaaaaaaaatgaaatg
ctggccgaacaatccggcctcggagacgcaggagaagatgcgctgaagcaggctgaacag
cagtttcacgaagcgaacgaacggcttgaagcagctgagaagaaacgggtccgggcaaaa
gagcgttttgagaatcaccaggaaatttggaacctgcagacagaaagagatgaatatgag
cgccgggagaaaaagcttgaggaaagacgcccgtacatcacggatttgactgagcgtctt
aaagaggcggaaacagctctcgcccttgagccgtacgcagaccgctacacagaagccgtc
cgccggaagcagcgcaccgaacaggaacacgaactggccaaacggaaatcagaggcggaa
accgtttcatttacccggcaaaatgaagcctatgaagcatggcgggcccataaggccgaa
caggagccgaagcttgtcaaggaagaagagctgtatcaaagactttcagccattgaacaa
aaactgcttgaagcgaaaaaagaagcggaaaaaacaaatgcggaacacagcaaaaaagag
gaagaatacgaagccgcctcgaaacagctggccgcagtgaaagaccgcctgacccgcggc
caaaacaggcagaatgagctgaaagaagagctgaaagcagttcaagtcaccgccgatgaa
cggaaaaaatgccagaccgcagcacagctggcggcgggctttcagcagacacaggaacaa
atcacgaaagaacgggccaatctgacaacgcagctgaaaaacatggagaagctgaacgga
gaaagcgagtcgctcacagcgaaagcgaaaacggaagaggaagacattacgcgcgcttat
caaacgcttcaaaccgtttaccatatggtctgtgaaacggaacgttcactgaaagccgca
gccgaacgggctgacaaaacgcaagccgatctccgcaggcgctcagaggaagcgagaacg
gctgcattaacaaaagaattatcggaaaaactaatcgaaggaaagccttgtcctgtatgc
ggctcaacgcagcatgaccgcccgcgatccgctcatgaaacattctcgcctgatacagct
gtacaggaacagttgcagcaggttgaagcgctgctttctgaggcggcggctctttctcag
gaagtgctgacagccaaggttgcattagaagaacagtcggggcgttttaccgaagaatgt
ccatttctgcaaagcgcccgggttccggagctggaagccgcttcttccatcagcggacgc
ccgcttgatgaaacgttcagcgccgtccgcttggaatggaaacaaatgaaacaggatatg
ctgtcggtaaaagagaaggtcacaagactgatcagcgcgcatcagcagacggtgagacaa
gctgagcagcttgccgaacgaatccgctacgaggaaaaagaagccgaccgtctcagacat
tcattagaagagcttgaatcgctgtcagaaagccgattgaatcagtacaacgaagtctgc
ggtgatattccgccaaaccggattgacgcctggcaggcttcgatagatgagaaggacagg
caggcagaagaatgtgagaagcgcattgaaacaagcatcgcattcctcaaggaacatgaa
gaggagaaagaacgcctgcaggagatgaagcatcggcttgaacgggaacggctcgagctt
cactatgcgtctgagcgcctgcagcaggtgattgacggatatgaacaagagctcggaaca
gcagctgaagaaacatcaatttccgcaaagcttgaagcggtgcggcaggaattacagctg
ttaaaatcgaaagaacagtccttattcgactcgctgaagcaggcgcagcaatcactgaat
gacgcaaaaggccgggaatccggcagtctcatgtcactcagggatgctgagacttccctt
gagaaagcgcaaaacgactggcgcgtgaggtcaaaagacaccgggtttgccgacccggac
caagtcaaaaaaagtctgcttccgcaagggcgtgcagaggaaatgaaaaaagaaattgat
gagttcctggacacctcaaaacagctatcggcaaatatcagccgtgttactgataaatta
gccgagcgccggatatcggaggaagaatggacagcatccgtttctctgctgaagcaggca
gaggctgagtcaggcgccgccatggaggaaaaaggagcacaggcaaaagccttcgcggtt
atgcaaaaacagcataagcgctttaaagagattgaagccgaactgaaaagctggcagaca
cagattgacaggcttgataagctccagtctgtatgtaaaggcaatacattcgtcgaattt
ttagcggaagaacagctggaaagcgtggctcgggacgcctctgcccgtctcggagcgctg
acaaggcagcggtatgccatattagtcgattcagaaggcggtttcgtcatgcgtgatgac
gcgaacggaggcgtcaaacggcccgtatcaagcctttccggcggggagacgtttctgaca
tcgctgtcgcttgcgcttgccttgtccgcccagattcagctgcgggggcaatacccgctg
caattctttttcttagatgaaggattcgggactcttgaccaagggctcttagacaccgtt
gtcacagcgctcgaaaagctgcaatcggacaacttatccgtcggagtgatcagccatgtg
caggagctgagagcgcgtctgccgaaaaaattaatcgttcatccgtccgaaccgggcggg
aaaggcacccgggtcacattggagatcatgtag
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