Bacillus velezensis SQR9: V529_12030
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Entry
V529_12030 CDS
T03384
Symbol
xpf
Name
(GenBank) positive control sigma-like factor
KO
K24072
positive control factor
Organism
bamy
Bacillus velezensis SQR9
Brite
KEGG Orthology (KO) [BR:
bamy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bamy03021
]
V529_12030 (xpf)
Transcription machinery [BR:
bamy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V529_12030 (xpf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
HTH_38
HTH_23
GerE
PhyR_sigma-like
UPF0122
HTH_36
HTH_29
Fe_dep_repress
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AHZ15229
LinkDB
All DBs
Position
1251782..1252294
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AA seq
170 aa
AA seq
DB search
MEDLLFEYKRTLKETKKWYKQLEEADETMLTSEELKDKKIIRTIITDVEYVIEWLEKGRQ
PGIRRAIDRRDAYQRMLIKDPRIIETYSQALMFEPSANVTEEDRIRLRDALAVLTDREKE
MLLLHKAECFSYERIAALLNVKKSTVQTTVKRALLKIQKQQEQRNQSPAS
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggaagacttactatttgaatataaacgcacgctgaaagagacgaaaaagtggtacaag
cagctggaggaagccgatgaaacgatgcttacttcagaagaactgaaagataaaaaaatc
atcagaacgatcattacagatgtggaatatgtcatcgaatggcttgaaaaaggccggcag
cccggcataagaagagcgatagaccgcagagacgcttatcagagaatgctgattaaagat
cctagaatcatagaaacctattcgcaggcgctgatgtttgaaccttccgcaaatgtgact
gaagaagacagaatcagactgcgggacgcattagccgttttaacggatagagaaaaagaa
atgctgctgctccacaaagcggaatgcttttcgtatgaacggatcgccgccttgctgaat
gtaaagaaatcaaccgtacagacgacggtcaaacgggcgcttctaaaaattcaaaaacag
caggaacaaagaaatcaatcgcctgcttcataa
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