Bacillus velezensis SQR9: V529_21250
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Entry
V529_21250 CDS
T03384
Symbol
himA
Name
(GenBank) putative HU-related DNA-binding protein (phage SPbeta)
KO
K03530
DNA-binding protein HU-beta
Organism
bamy
Bacillus velezensis SQR9
Brite
KEGG Orthology (KO) [BR:
bamy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bamy03032
]
V529_21250 (himA)
03036 Chromosome and associated proteins [BR:
bamy03036
]
V529_21250 (himA)
03400 DNA repair and recombination proteins [BR:
bamy03400
]
V529_21250 (himA)
DNA replication proteins [BR:
bamy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
V529_21250 (himA)
Chromosome and associated proteins [BR:
bamy03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
V529_21250 (himA)
DNA repair and recombination proteins [BR:
bamy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
V529_21250 (himA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
DUF2267
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
VWA_3
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AHZ16151
LinkDB
All DBs
Position
2216612..2216887
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AA seq
91 aa
AA seq
DB search
MNKTEFVGEVAENLGVTKKEAAPKVEAVFNVIVETLTKGESIKIPGVGTFEVRERAARKG
RNPQSGEEIDIPATKAPAFKAAKALKDAVKA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagaatttgttggagaagttgcagaaaatttaggagttactaagaaagaa
gctgcgcctaaagtagaagcagtatttaatgtgatcgttgaaacacttacaaaaggtgaa
tcaatcaagatccctggagttggaacgtttgaagttcgtgaacgtgcagctcgtaaaggg
agaaatccacaatcaggtgaggaaattgatattccggctacaaaggcgcctgcattcaag
gctgctaaagctctaaaagacgcagtgaaagcttaa
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