Bacillus velezensis SQR9: V529_23870
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Entry
V529_23870 CDS
T03384
Symbol
recQ
Name
(GenBank) RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bamy
Bacillus velezensis SQR9
Pathway
bamy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bamy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V529_23870 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bamy03019
]
V529_23870 (recQ)
03400 DNA repair and recombination proteins [BR:
bamy03400
]
V529_23870 (recQ)
Enzymes [BR:
bamy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V529_23870 (recQ)
Messenger RNA biogenesis [BR:
bamy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
V529_23870 (recQ)
DNA repair and recombination proteins [BR:
bamy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
V529_23870 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AHZ16413
LinkDB
All DBs
Position
complement(2441490..2442980)
Genome browser
AA seq
496 aa
AA seq
DB search
MTELHKALSRYFGLHSFKKGQEEIMTSVLQKKDTIAMLPTGGGKSLCYQLPGYMMDGLVL
IISPLLSLMEDQVQQLKAKGEKRVAALNSMLNSAERHFILSNISRYKFLYMSPEALSSPY
VLNRLKNVPVSLFVIDEAHCISEWGHDFRPDYSKLGPFRQALGKPPVLALTATATKETLR
DVMDVLGLEHAVRHLYSVNRPNILLAAEHLADNAEKISRLTELAEKLEGPGIIYCPTRKW
AEELAAELNEKTGKRTDYYHGGMDTGDRILIQQQFIHNQLDCICCTNAFGMGVDKSDIRF
VIHFYPPQTAEAFMQEIGRAGRDGSPSVSILLRAPGDTELQQQIIQTESLSDYDLEGILA
VIRDAGTSDERKLRDVLINKGVQETQARTAVHLYLQGKTTKEQLQEELTYRVEKKLRKMN
RFSALLERKECIREALLSYFDESYEPEGQTGQCCSSCGLDLAPYEQKGERKNMERFEDWK
LELGRIFGSESAGEFS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgactgagctgcataaagctttatccaggtattttggtttgcattcctttaaaaagggg
caggaagagattatgactagcgtgctccaaaaaaaagatacgatcgccatgcttccgacc
ggcgggggaaaatcattatgctatcagctcccgggttacatgatggacgggctggtgctg
attatttcgccgcttctatcattaatggaagatcaggtgcagcagctgaaagcgaaagga
gaaaagcgggttgctgcattaaacagcatgctgaattccgcagagcggcattttattctc
agcaacatcagcaggtataaatttctctatatgtctcctgaagccctttcttcaccttat
gtactgaaccgtttgaaaaacgttccggtcagtttatttgttattgatgaggctcattgc
atatcagaatggggacatgatttcaggcctgattactcgaagctcgggcctttcaggcag
gcactcggaaagccgcctgtattggcgctgaccgcaacagcgacaaaagaaacactcaga
gacgtgatggatgtgctcggacttgagcatgcggtgcgtcatctttattcagtcaaccgg
ccgaatattctcctggcggcagaacatttggcggataatgccgagaaaataagcaggctc
acggagcttgccgaaaagcttgaaggcccgggtatcatatattgtccgaccagaaaatgg
gcggaagagcttgcggctgagctgaatgaaaaaacgggaaagcggacggattattatcac
ggcggaatggatacaggggacagaatcttaatccagcagcaatttatccataaccagctt
gattgcatctgctgtaccaatgcgttcggcatgggtgtggataagtcagatatccgcttt
gtcattcacttttatcctccccaaacggctgaggcctttatgcaggaaatcggcagagcg
ggacgcgacggcagcccgagtgtcagtattttgctgagggcgcccggcgataccgagctt
cagcagcagattattcagacagaaagcctgtctgattatgatctggaaggcattctggcc
gtcatacgggatgccggtacgagtgatgaacgaaagcttcgggacgttctgatcaacaag
ggcgtccaggaaacacaggcgcgaacggccgtccatctgtatctgcaaggaaaaaccaca
aaagagcagctacaggaagaactgacataccgcgtggaaaagaagctgcgtaaaatgaat
cgtttttcggcgttattagagcggaaagaatgtataagagaagcgctgctgtcttatttt
gatgaatcgtatgagcctgaaggtcaaaccggacaatgctgcagcagctgcggacttgat
ctggctccgtacgagcaaaaaggagaacgtaaaaatatggaacggtttgaagattggaag
ctggaattaggccggattttcggttcagagtctgcgggtgagttcagctga
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