KEGG   Bacillus velezensis SQR9: V529_28520
Entry
V529_28520        CDS       T03384                                 
Symbol
yshC
Name
(GenBank) DNA polymerase/3'-5' exonuclease X
  KO
K02347  DNA polymerase (family X)
Organism
bamy  Bacillus velezensis SQR9
Brite
KEGG Orthology (KO) [BR:bamy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bamy03400]
    V529_28520 (yshC)
DNA repair and recombination proteins [BR:bamy03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerase
    V529_28520 (yshC)
SSDB
Motif
Pfam: DNA_pol_B_thumb HHH_8 PHP HHH_5 RNase_P_p30 IMS_HHH DNA_pol_B_palm
Other DBs
NCBI-ProteinID: AHZ16878
UniProt: A0AAU8QAB1
LinkDB
Position
complement(2918862..2920610)
AA seq 582 aa
MMKSRKRLGVNSMHKKDIIRLLETIAVYMELKGDNPFKISAFRKAAAALEQDDRSLSEID
DMMSISGIGKGTYGVIREYMQEGVSGTLLQLQKEVPEGLVPLLKLPGLGGKKIAKLYQEL
GVHDAESLKEACEQQKVQGLAGFGKKTEEKILQALGEAGKQPERFPIGYALGIASVIEEH
LARLTDIQKYSRAGSLRRARETVKDLDYIIATDHPEAVREQLLSLPNVKDVIASGDTKVS
VILTFEYETSVDFRLVTEEQFATTLHHFTGSKDHNIKMRQLAKERGERISEYGVETIETG
DVKTFPSEEAFYAHFGLPFIPPELRETGQEVDTYREETDLVEHKAIKGDLHMHSAWSDGA
FSIREMAEACMAKGYQYMAITDHSQYLKVANGLTAERLKKQAEEIDALNAEFENFHIFKG
VEMDILPDGSLDYDDSVLSEMDLVIASIHSSFSQPEHVIMKRLEQALTNKHVDIIAHPTG
RLIGRRAGYEVDIDMLIELAAKTNTALELNANPARLDLRTEHLIKANEKGVTLVINTDAH
NIEMLDDMKTGVTAARKGWTETKQVLNARPLHEVKAFLTRND
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgatgaaaagcaggaaacgactgggggttaacagtatgcataaaaaagatatcatcagg
ctgcttgaaacgattgcggtctatatggaactgaaaggggacaacccgtttaaaatatca
gccttccgaaaagcggcagcggcgcttgagcaggatgaccgcagcctgtcggaaatcgac
gacatgatgtctatatccggcatcggaaaaggcacttacggcgtcattcgtgaatatatg
caggaaggtgtgtccggcacgcttctccaattgcagaaagaagttccggaaggcttggtt
cctcttttgaagcttccgggcctcggcggcaaaaaaatcgccaagctgtatcaggaactg
ggcgttcatgacgcggaatcgctgaaagaagcgtgcgagcagcaaaaagtacaggggctc
gccggtttcggcaaaaaaacggaggagaaaatccttcaggctctcggagaagccggaaaa
cagccggaacggtttccgatcggctatgcgctcggtattgcttcagtaattgaagaacat
ttagcccggctgacggatattcagaaatattcccgggccggcagtctcagaagagcgcgg
gaaaccgtaaaagatctggattacattatcgctacagatcatccggaggctgtcagagaa
cagcttctttccctcccgaacgtaaaagacgtgatagcgagcggggatacaaaagtatca
gtcatcctgacctttgaatatgagacgagtgtggatttccggcttgtgacagaggaacag
tttgccaccacactgcatcattttaccggttctaaagatcacaacattaaaatgcgccag
ctggcgaaagagcgcggtgaacggatcagtgaatacggagtagaaaccatagaaacggga
gacgtcaaaacattcccgagcgaagaagcgttttacgcccacttcggtctgccgtttatt
cctcctgagctcagagaaaccgggcaggaggtcgacacgtaccgggaagaaacggacctt
gtggagcataaagcgataaaaggcgatctccacatgcactcagcctggagtgacggcgct
ttttccatcagagaaatggcagaagcttgtatggcaaaaggctatcagtacatggcgatt
accgaccattcccaatatttaaaggtagccaacgggttaacggccgaacggctcaaaaaa
caggcggaagaaattgatgcgttaaatgctgaatttgaaaattttcatatttttaaaggc
gtagaaatggacattctccccgacggttcgctcgattatgatgacagtgttctgtctgaa
atggatcttgtcatcgcgtctattcattcaagcttcagccagccggagcatgtcattatg
aaacggcttgaacaggcgctgacgaataagcacgtggacattatcgcccacccgacggga
cgcctgatcggcagacgggccggctatgaagtcgacatcgacatgctgattgaactcgcc
gccaaaacaaatacggcgcttgaactgaatgcaaaccccgcgcgccttgatttgcggact
gagcatctgatcaaagcaaatgaaaaaggtgtgactttggtcattaataccgatgcccat
aatatcgagatgctcgatgatatgaaaacgggcgtgaccgctgcgcgcaaaggctggacg
gaaacaaaacaagtgttaaacgcccggccgctacacgaggtcaaagcatttctgacgcgc
aatgattaa

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