Bacillus velezensis SQR9: V529_29010
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Entry
V529_29010 CDS
T03384
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bamy
Bacillus velezensis SQR9
Pathway
bamy03030
DNA replication
bamy03410
Base excision repair
bamy03420
Nucleotide excision repair
bamy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bamy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V529_29010 (polA)
03410 Base excision repair
V529_29010 (polA)
03420 Nucleotide excision repair
V529_29010 (polA)
03440 Homologous recombination
V529_29010 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bamy03032
]
V529_29010 (polA)
03400 DNA repair and recombination proteins [BR:
bamy03400
]
V529_29010 (polA)
Enzymes [BR:
bamy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V529_29010 (polA)
DNA replication proteins [BR:
bamy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
V529_29010 (polA)
DNA repair and recombination proteins [BR:
bamy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
V529_29010 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V529_29010 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
HHH
F420_ligase
Enkurin
Motif
Other DBs
NCBI-ProteinID:
AHZ16927
UniProt:
A0AAU8QCJ5
LinkDB
All DBs
Position
complement(2967427..2970066)
Genome browser
AA seq
879 aa
AA seq
DB search
MTERKKLVLVDGNSLAYRAFFALPLLSNEKGIHTNAVYGFAMILMKMLEDEKPTHMLVAF
DAGKTTFRHSTFKEYKGGRQKTPPELSEQMPFIRELLDAYKISRYELPEYEADDIIGTLA
VSAEKEGFEVKVVSGDKDLTQLATGKTTVAITRKGITDVEDYTPEHVEEKYGLTPLQIID
MKGLMGDSSDNIPGVPGVGEKTAIKLLKQFHSVEKLLDSIDEVSGKKLKEKLEEYKEQAL
MSKELATIMTNAPIEVKPEDLDYKGFDREQVVAIFKDLGFNTLLERLGEESGETADENFE
DINVETAEEITEDMLVSPSALVVEQIGDNYHEEPILGFSIVNETGLYYIPKEIAIQSEAF
KSWAEDESMKKWVFDSKRSVVALRWQGIELKGTEFDALLAAYIINPGNSYDDVASVAKEY
GLNIVSKDEAVYGKGAKRAVPAEKELADHLVRKASAVNSLRDKLLDALEENNQLELYEDL
ELPLALILGEMESMGVKVDVERLKRMGEELKAKLKEYEEKIHDIAGEPFNINSPKQLGVI
LFEKLGLPPVKKTKTGYSTSADVLEKLADKHDIVAYILQYRQIGKLQSTYIEGLLKVTRK
DSHKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSEPDWLIFAADYSQI
ELRVLAHISKDENLIEAFTNDMDIHTKTAMDVFHVSEDEVTQAMRRQAKAVNFGIVYGIS
DYGLSQNLGITRKEAGAFIDRYLESFPGVKAYMEESVQEAKQKGYVTTLMQRRRYIPELT
SRNFNLRSFAERTAMNTPIQGSAADIIKKAMIDMAAELKEKNLKARLLLQVHDELIFEAP
KEEIEILEKLVPEVMEHALALDVPLKADYASGPSWYDAK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacgaaaaaaattagtgcttgtcgacggaaacagtctggcgtaccgggcgttt
tttgcattgccgcttttaagcaatgaaaaaggcatccatacaaatgccgtatacgggttt
gcgatgattttaatgaaaatgctggaagatgaaaagccgacccacatgctggtggctttt
gatgcgggaaaaaccactttccgccacagcacgtttaaagaatataaaggcggaagacaa
aaaacgccgccggagctttcagaacagatgccgttcatccgcgagctccttgatgcctac
aaaatcagccgctacgagcttcctgaatatgaagcggacgatattatcggcacccttgcc
gtatctgctgaaaaagaaggcttcgaagtaaaggtagtgtcgggggacaaggacttaacc
cagcttgcaaccgggaaaacgaccgttgccattacgagaaaaggcattactgacgtggaa
gattacacgccggagcacgtggaagaaaagtacggtctgacccctttgcaaatcattgat
atgaagggattaatgggggattcatccgataacataccgggcgtccccggcgtcggagaa
aaaaccgcgattaagctcttaaagcagttccattcggttgagaaactgcttgattccatt
gatgaagtcagcggaaaaaaattaaaagaaaagcttgaagaatataaggaacaagccctg
atgagcaaagagctggcgacgattatgacaaatgcgccgattgaagtcaagcccgaagat
ttagattacaaagggtttgaccgtgaacaagttgttgccatttttaaagacctcggtttt
aatacgcttcttgagcggctcggtgaagaaagcggggaaacggcggatgaaaattttgaa
gacatcaatgtcgaaacggcagaagaaatcaccgaagatatgctcgtttcgccgtccgct
ttggtcgtcgaacaaatcggtgataactatcacgaagaaccgatcctcggcttttccatc
gtgaatgaaacaggtctttattatattccgaaagaaatcgccattcagtctgaagctttt
aaatcttgggctgaagatgaatcgatgaaaaaatgggtgttcgacagcaaacgttccgtc
gtcgctttgcgctggcagggaattgagctgaagggaacggaatttgacgcgcttcttgct
gcctacattataaacccgggcaattcgtacgacgatgtcgcgagcgtagcgaaagaatac
gggctgaatatcgtttcaaaagatgaagcggtatacggaaaaggcgcaaagcgcgccgtt
ccggctgaaaaagagcttgccgatcatctcgtgcggaaagcgtctgccgttaacagcctt
cgtgacaaattgcttgacgctttggaagaaaataatcagcttgagctttatgaagatctc
gaactcccgcttgcgcttattctcggagaaatggaatcaatgggcgtcaaagtggatgtt
gaaagactgaagcgaatgggcgaagagctcaaggcaaagctgaaagaatatgaagaaaaa
atccatgacatcgccggtgagccgtttaacatcaattcaccaaaacagctcggcgtcatt
ctgtttgaaaaactcggcctgccgccagtaaagaaaacaaaaacaggctattccacttca
gctgatgtgcttgagaagctcgccgacaaacatgatatcgtcgcgtacattctgcaatac
agacaaatcggcaaactccaatcgacttatattgaagggctgctgaaggtcacgcgcaag
gattctcataaggtgcatacacggttcaatcaggcgttgactcaaaccggacgcctcagc
tcaacggacccgaacctgcaaaatattccgatccggctggaggaagggcggaaaatccgt
caggctttcgtaccgtccgaaccggactggcttattttcgccgccgattattcacaaatt
gaattaagggtgcttgcgcatatttcaaaagatgaaaatctgatcgaagcgtttacgaat
gacatggacattcacacaaaaaccgccatggacgtgtttcatgtcagtgaagatgaagtg
acacaagcgatgcgccgccaggcaaaggccgtcaatttcggcattgtttacggcatcagt
gattacgggctgtcacaaaacctcggcatcacccggaaagaagcgggcgcttttatagac
cgctatttggagagcttcccgggcgtcaaggcatatatggaagaatcggtgcaggaagcg
aagcaaaaaggatatgtcacgacacttatgcagcgccgccgctatattcctgagctgacc
agccgcaacttcaacctgcggagctttgcggaacggacggccatgaatacgccgattcag
ggaagcgccgccgatattattaaaaaagccatgattgacatggcagctgagctgaaagag
aaaaacctgaaggcacgactgctgcttcaggtgcacgatgaattgatttttgaagcgcct
aaggaagaaattgaaatattagagaagctggttcctgaagtgatggagcatgctttggca
ttagacgtgccgctgaaggcggattatgcttcagggccgtcttggtacgatgcaaaataa
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