KEGG   Bacillus velezensis SQR9: V529_29900
Entry
V529_29900        CDS       T03384                                 
Symbol
ytlP
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
bamy  Bacillus velezensis SQR9
Brite
KEGG Orthology (KO) [BR:bamy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bamy03016]
    V529_29900 (ytlP)
Enzymes [BR:bamy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     V529_29900 (ytlP)
Transfer RNA biogenesis [BR:bamy03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    V529_29900 (ytlP)
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS
Other DBs
NCBI-ProteinID: AHZ17016
UniProt: A0AAU8QCF1
LinkDB
Position
complement(3057370..3057921)
AA seq 183 aa
MKASLPHYFIGIPIPADIAEPIWEAAKKEPALSFKKWMHPHDYHITLIFLGAADEERLAK
LSSLLADTASAAQPFTVQFQHLDIFGDRRQPRVLHLEPERNELLFDLREKTKQAVLKAGF
QVEKRPYHPHMTMARKWAGDRPFPDDVPFESGRVQSAVSRFSLFQTHLDRSPKYEEIAQF
QLT
NT seq 552 nt   +upstreamnt  +downstreamnt
atgaaagcttcattgccgcattattttatcggcattccgattccggctgacattgctgaa
ccgatttgggaagcagccaaaaaggagccggcgttgtcattcaaaaaatggatgcacccg
catgactatcatattacactcatttttctcggagccgcggatgaagaacggcttgcgaaa
ttatcgtcgctgctcgcagatactgcgtcggcagcgcagccgtttaccgtacagtttcag
catctggatattttcggcgaccgcagacagccgagagtgcttcaccttgagcccgaacgg
aatgaactgctctttgatttgcgggaaaaaacaaaacaggctgttttgaaagccggtttt
caagtggaaaaacggccttatcaccctcatatgacgatggcgcggaagtgggcgggagac
cggccgtttcctgacgatgtgccgtttgaaagcggcagggtgcaaagtgccgtcagccgg
ttttccctgtttcagacccatcttgaccggtcgcctaaatacgaagaaatcgcacagttt
caattgacataa

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