Bacillus velezensis SQR9: V529_34140
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Entry
V529_34140 CDS
T03384
Symbol
sigL
Name
(GenBank) SigL
KO
K03092
RNA polymerase sigma-54 factor
Organism
bamy
Bacillus velezensis SQR9
Pathway
bamy02020
Two-component system
bamy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bamy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
V529_34140 (sigL)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
V529_34140 (sigL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bamy03021
]
V529_34140 (sigL)
Transcription machinery [BR:
bamy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V529_34140 (sigL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
MarR_2
HTH_32
HTH_IclR
Sigma70_r4
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AHZ17440
LinkDB
All DBs
Position
complement(3471610..3472923)
Genome browser
AA seq
437 aa
AA seq
DB search
MMDIKLQQTQMLKPQLTQELKQAITLLGYNSAELAGYIDELSLENPLIERKETDTPPLSY
HKTNKNRMKERDGSQQIRLTRKTLQDSLKQQALDMKLSDDEKKIFNYLIHSLDSNGYLKE
DIPAAADHVSASQEETEAVLKKLQSLEPAGIGARSLQECILLQLRRLPERNEQAEWIAEA
YFELFARKNWKALTLKTGIPLKDIQDIADMISALDPRPGLCYAHEEPGFYVEPDIFITVK
NGIIQARLNSRSFPDIQLHTHYQPLLSAAGCRDTKNYLSAKYQEWRWLNRALSQRKQTIT
RIIGVLTERQESFFLTGKSGMQPLTLREVAETLELHESTISRAIKGKYVQTPYGLYEMKT
FFSAKAESSGDGGASNYAVKAHLEALVGKEDKKKPFSDQKLADLLYEQYDIRISRRTVAK
YRDQLNIPPSSARKRYS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgatggatatcaaacttcagcaaacacaaatgttaaagcctcaattaacgcaagagctt
aaacaggctatcacattactcggatacaattccgcggaactggccggatatattgatgag
ctctcactggaaaaccctctgattgaacgaaaggaaacagacacgccgccactatcttac
cataaaacaaataaaaacaggatgaaagaacgggacggaagccagcagatcagacttacc
cgcaaaacgcttcaggattcgctcaaacagcaagccttagacatgaagctgtccgatgat
gagaaaaaaattttcaattatctgatacattcattggattcaaacggatatttaaaagag
gatataccagccgccgccgaccatgtatccgcttcacaagaggagacggaagcggttctg
aaaaagcttcaatcccttgagcccgcgggaatcggtgcccggtctttgcaggaatgcatc
cttcttcagctccgccgtttgcccgagcggaacgaacaggcggaatggattgccgaagcc
tattttgagctatttgcaagaaagaactggaaagcgcttacactaaaaacgggcattccg
cttaaagacattcaggacatcgctgacatgatcagcgcgcttgatccgaggccggggctc
tgttatgcgcatgaggagccgggtttttacgtggaaccggatattttcatcacagtgaaa
aacggcatcattcaagcgcggctcaacagccgttcgtttcctgacatccagcttcatacc
cattatcagccgctgctgtcagctgccgggtgccgtgacacaaaaaattatctgtcggca
aaatatcaggaatggcgctggctgaaccgagctttgtcgcaaagaaaacaaacgatcacg
agaattatcggcgtcctgactgaacggcaggaatccttttttctcacaggaaaaagcgga
atgcagccgctgaccttaagagaggtggcggaaacgctggagctccacgaatcaacgatc
agccgggcaatcaaagggaagtacgttcagacgccgtacggactgtatgaaatgaaaaca
tttttctcggcgaaagctgaatcgtcgggggacggcggcgcctccaattatgccgtgaaa
gcacatctggaggcattggtcggtaaagaagataaaaagaaacctttttcagaccaaaag
cttgccgatctgctgtatgaacaatatgacatccggatctcaaggcgcaccgtcgccaaa
taccgtgaccaattaaatattccgccgtcatcggcgagaaaacggtacagctga
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