Bacillus velezensis SQR9: V529_37010
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Entry
V529_37010 CDS
T03384
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
bamy
Bacillus velezensis SQR9
Pathway
bamy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bamy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
V529_37010 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bamy03021
]
V529_37010 (rpoE)
03400 DNA repair and recombination proteins [BR:
bamy03400
]
V529_37010 (rpoE)
Transcription machinery [BR:
bamy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
V529_37010 (rpoE)
DNA repair and recombination proteins [BR:
bamy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
V529_37010 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
AHZ17727
LinkDB
All DBs
Position
complement(3742928..3743455)
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AA seq
175 aa
AA seq
DB search
MSIKQYSQEQLKQMALVEIAHEIFSEHKKPVPFQELLNEMISLLGVTKEELGDRIAQFYT
DLNIDGRFIALSDQTWGLRSWYPYDQLDEETQPTVKAKKKKAKKVVEEDLDLDEFEEVDE
DDIDLDEIEEDIDLDADSFDDEDIDEEDDDELEIEDDVIEEDEEDYDDEEEERKD
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
ttgagtatcaaacaatattctcaggaacagctgaagcagatggctttagttgaaatcgct
cacgaaattttctcagaacataaaaaaccggttccgttccaggagctgctgaatgaaatg
atctccttgctcggtgttacgaaagaggaactgggcgaccgtatcgcccaattttataca
gacctgaacattgacggccgctttattgctctgtcagaccagacgtgggggcttcgcagc
tggtatccgtacgatcagctggacgaagaaacacagccgactgtaaaagcgaaaaagaaa
aaagcgaaaaaagtcgttgaagaagatctcgaccttgatgaattcgaggaagttgatgaa
gatgacatcgatctcgatgaaatagaagaagatattgaccttgacgcagacagcttcgac
gacgaagatatcgatgaagaagatgacgacgagcttgagatcgaagacgatgtgattgaa
gaagatgaggaagattatgatgatgaggaagaggaacgcaaagactga
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