Candidatus Bipolaricaulis anaerobius: BARAN1_0282
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Entry
BARAN1_0282 CDS
T05525
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bana
Candidatus Bipolaricaulis anaerobius
Pathway
bana03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bana00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BARAN1_0282 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bana03019
]
BARAN1_0282 (pnp)
03016 Transfer RNA biogenesis [BR:
bana03016
]
BARAN1_0282 (pnp)
Enzymes [BR:
bana01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BARAN1_0282 (pnp)
Messenger RNA biogenesis [BR:
bana03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BARAN1_0282 (pnp)
Transfer RNA biogenesis [BR:
bana03016
]
Prokaryotic type
tRNA degradation factors
BARAN1_0282 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
KH_PNO1_2nd
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
SQD92307
UniProt:
A0A2X3K4X4
LinkDB
All DBs
Position
BARAN1:274627..276966
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AA seq
779 aa
AA seq
DB search
MPQVEMMLGGKALRLESGTIARQADAAVLATWGDTKVLVTVVCQPTTQELDYFPLRVDFE
ERFYAGGKIPGGFFKREGRPSDDAVLAARLIDRPIRPLFPDGYREEVHIVATVLSAERDA
PPDVVGLLGASAALMISPAPFAGPVAAVRLGMDEERIVVHPTDDVREGGRMDIVVAGTRS
TVTMVEGHLREVADEQVVEAIEAAHAVIRELIAFQEKFVAQHTIAKRTAAVPTAEILDVR
GKVRELVWPRLPELRAAPTKLARERMAQTLATEAAAAVTAGYPEEKQAMIAALVTQLFDD
VYREFVRQAILDRGERMDGRRLNEIRPISIQVGLLPRVHGSALFTRGETQSLGTCTLGAT
RRDAQIVDLMMEEGLKRFMVHYNFPPYATGEAGRIGSPSRRAIGHGRLAEGALLAVLPSE
DDFPYIIRVVSEITESNGSSSMASVCSGSLAMMDAGVPLKRPVAGVAMGLVGDEATGKYV
ILTDILGLEDHYGDMDFKVAGTREGVTAFQLDVKTGGITPDLMRQAMAQARQARLAILDQ
MDAVLPKPRPSLSPYAPCLDVVKVNPEKIGAIIGPGGRVIRKLQEDTGTEIDIEDDGTVK
IVGDSADAVGLARQAIEELTAEVEVGMTFHAKVVRTAPFGAFVELRPGVDALVHISNLSD
GYVKKVEDVVRVGDEILVEVIETDENGRIRCKVVQEKPQLKVGDIISGQVTNVVDYGVFV
EIAPGVRGLVHKSRLGTQAEPAEVAKKGDRMLVEIMEIEEQGRYKLRRVVPTEPSAPSA
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgccacaggtagagatgatgcttgggggaaaggctctccggttggagagcgggaccatt
gcccggcaggccgatgccgcggtcctcgcgacgtggggcgacacgaaggtcctcgtgacg
gtggtctgccagccgacgacccaggagctcgattacttcccgctccgggtggatttcgag
gagaggttctacgcgggggggaagatccccggcgggttcttcaagcgggaggggaggccc
tccgacgacgccgtgctcgcggcgcgcctcatcgaccgcccgattcgccccttgttcccc
gatggataccgggaggaggttcacattgtggccaccgtcctctcggcggagagggatgcg
ccaccggacgtggtagggctcctcggcgcctcggcggcgctcatgatctcccccgccccg
tttgccgggccggtggccgcggtgcggttggggatggacgaggagaggatcgtcgtccac
ccgaccgatgatgttcgcgagggagggcggatggacatcgtcgttgctgggacccggtcc
acagtgacgatggtggaaggccacctgcgggaggttgcggacgagcaggtggtggaggcg
atcgaggccgcccacgcggtcatccgggaattgatcgcgttccaggagaagttcgttgcc
cagcacacgatcgccaagaggacggcggcggtgcccaccgccgagatcctggacgtgcgc
ggcaaggtgagggagctcgtgtggccccgcctgcccgagctgcgggctgctcccaccaag
cttgcgcgggagaggatggcgcagacgctcgccaccgaggccgcggcagcggtgaccgcc
gggtacccggaggagaagcaggccatgatcgctgccctcgtcacccagctcttcgacgac
gtgtaccgggagttcgtccgtcaggcgatcctcgaccggggggagcggatggatgggcgg
cgactcaatgagatccggcccatctcgattcaggttgggcttctcccccgcgtccacgga
tcggccctgttcacgcgtggggagacccagtccctcggcacgtgcaccctcggggcgacg
cgccgcgatgcccagatcgtggacctgatgatggaggagggattgaaacggttcatggtc
cactacaacttccctccctatgccacgggcgaagcagggcggatcggctccccctcccgc
cgcgcgatcggccacggccggctcgcggagggagcgctattggcggtgctcccctcggaa
gatgatttcccctacatcatccgcgtcgtgtcggagatcacggaatcgaacgggtcctcg
tccatggcctccgtgtgttcggggagcctcgcgatgatggacgccggggtccccctcaag
cggccggtggcgggggtggcgatggggctcgtcggcgatgaggcgacgggcaagtatgtc
atcctcaccgatatcctcggcctggaggaccactacggggacatggacttcaaggtcgcg
gggaccagggagggcgtgaccgcgttccagctcgacgtgaagacgggcggcatcacgccc
gatctcatgcggcaggcgatggcccaggcccgccaggcgcggttggcgatcctcgaccag
atggacgccgtcctccccaagccgcggccgtccctctccccctatgccccgtgtctcgac
gtggtgaaggtcaatcccgagaagatcggggcgatcatcggccccggggggcgggtcatc
cgcaagctccaggaggacacgggcacggagatcgacatcgaggacgacggcacggtgaag
atcgtgggcgattccgccgatgcggtgggcctcgcccggcaggcgatcgaggagctcacg
gcggaggttgaggtggggatgaccttccacgccaaggtcgtgcgcactgccccgttcggg
gcgttcgtcgagctgcggccgggggtggacgccctcgtccacatctcgaacctgtccgat
ggctacgtgaagaaggttgaggacgtggtccgggttggcgacgagatcctggtcgaggtg
atcgaaaccgacgagaatgggcggatccgctgcaaggttgtccaggagaagccgcagctc
aaggtgggggacatcatctctggccaggtcacgaacgtcgtggactacggggtgttcgtg
gagatcgcccccggcgtgcgtgggctcgtccacaagtcgcgcctcgggacgcaggccgag
ccggctgaagtggcgaagaagggcgaccggatgctcgtggagatcatggagatcgaggaa
cagggccggtacaagctgcggcgggtagtgcccaccgagccctccgcacccagcgcatga
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