Candidatus Bipolaricaulis anaerobius: BARAN1_0405
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Entry
BARAN1_0405 CDS
T05525
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
bana
Candidatus Bipolaricaulis anaerobius
Brite
KEGG Orthology (KO) [BR:
bana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bana03032
]
BARAN1_0405 (hup)
03036 Chromosome and associated proteins [BR:
bana03036
]
BARAN1_0405 (hup)
03400 DNA repair and recombination proteins [BR:
bana03400
]
BARAN1_0405 (hup)
DNA replication proteins [BR:
bana03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BARAN1_0405 (hup)
Chromosome and associated proteins [BR:
bana03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BARAN1_0405 (hup)
DNA repair and recombination proteins [BR:
bana03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BARAN1_0405 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
SQD92430
UniProt:
A0A2X3L0Y2
LinkDB
All DBs
Position
BARAN1:complement(393627..393950)
Genome browser
AA seq
107 aa
AA seq
DB search
MNKGELVDRIAQRTGLTKKDARKALDATIDIITESIAANEEVLLTGFGKFEVRTRKQSQR
INPQTQRRIMVPAKVVPAFKPGKNLKTLVAKRLTVVDQRGQLAVKKR
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagggagaactggtagatcggattgcacagcggactgggcttacgaagaaggac
gctcggaaggcgctcgatgccacgattgacatcatcacggagagcatcgccgccaacgag
gaggtcctcctgacggggttcgggaagttcgaggtgcgcacgcggaagcagtcgcagcgc
atcaacccgcagacccagcggcggatcatggtgccggcgaaggtcgttccggcgttcaag
cccggtaagaacctgaagaccctggtcgccaagcgcctaacggtggtggatcagcgcggc
cagttggcagtgaagaagcgctga
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integrated database retrieval system
