Candidatus Bipolaricaulis anaerobius: BARAN1_0457
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Entry
BARAN1_0457 CDS
T05525
Name
(GenBank) conserved protein of unknown function
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bana
Candidatus Bipolaricaulis anaerobius
Pathway
bana03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bana00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BARAN1_0457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bana03019
]
BARAN1_0457
Messenger RNA biogenesis [BR:
bana03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BARAN1_0457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
RMMBL
Lactamase_B
RNase_J_b_CASP
Motif
Other DBs
NCBI-ProteinID:
SQD92481
UniProt:
A0A2X3KIQ6
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All DBs
Position
BARAN1:complement(450538..452091)
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AA seq
517 aa
AA seq
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MELRILDGADSIGGTKVFLHTGASRLLLDFGINYKRFGLYFEEYLKPRSSQGLADLWQLG
LIPPCPDLYRPDLWVEGFAPAGDDLAVELILLSHPHMDHCGLLGVVRPEIPVGASPRGWA
VLKAIQDAGKSEFYAETAYVVPRVPQSRRALTAAGVKERPAQGREIRFIGGEAGPELREF
LSSSPSPSGRGLEPAGIHGFAGRVGGYEVRAFPVDHSVPGALAYAVETDRGWVVYTGDLR
RHGTEGETTRRFIEEARALRPALLLSEGTRAGRAEGECTTEEQVQARAHDIVVRGKGRLV
LADFSPRHVERLTAFLAIAAATDRRLAILAKDMYLLEALARCGGMEGVVGSPHLVVYDDV
VVKPDIWNRDLRERHRARLVGPDEVRADPGGFLLAFSFWDLKNLLDIRPTGGVYIYSSSE
AYGEEQAIDMHRLWNWLQLFGFEVHGFAVDGHGELSFGGGLHASGHASGEELLAMAREIR
PRILVPLHTERPDLFVTGLRGEPIEVRLIPNGGSLSL
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
gtggagctcaggatcctcgatggagcggactcgatcggagggacgaaggtcttcctccac
accggcgcgagccggctcctcctcgatttcgggatcaactacaagcggttcgggctgtac
ttcgaggagtacctcaagccgcggagctcccagggcttggccgacctgtggcagctcggg
ctcattcccccctgccccgacctctaccggcccgatctctgggtggaggggttcgccccg
gcgggagacgacctcgccgtggagctcatcctcctttcccatccccacatggatcactgt
ggcctcctcggcgtggtacggccggagatcccagtgggtgcctccccgcgggggtgggct
gttctgaaggcgatccaggacgcgggcaagtccgagttctatgccgagacggcgtacgtc
gtgccccgcgtgccccagagcaggcgcgccctcaccgccgcgggggtcaaggaacggcct
gctcaggggcgggagatccgattcatcggaggtgaggccggccccgagctgcgggagttc
ctctcctcctcgccgagcccgagcggccgcggcctcgaaccggccgggatccacgggttc
gcgggccgggtgggagggtatgaagtgcgggcgttccccgtcgatcactccgtcccgggc
gccctcgcctacgccgtggagaccgaccgaggctgggtcgtgtacaccggcgacctccgc
cggcacggcaccgagggggagacgacgcggcggttcatcgaggaggcgcgggccctgcgc
cccgccctcctcctcagcgaggggacgcgggccggccgggcagagggggagtgcacgacc
gaggaacaggtccaggcgcgagctcacgacatcgtcgtccggggcaagggacggctcgtc
ctcgccgacttcagcccccgtcacgtggagaggctcacagccttcctcgctatcgccgca
gcgaccgatcggcggctggcgatcctcgccaaggacatgtacctcctcgaggccctcgcc
cggtgcggggggatggagggcgtggtgggctccccgcacctcgtcgtgtacgatgacgtt
gtggtcaagcccgacatctggaaccgggacctccgcgagcggcaccgcgcccgcctcgtg
gggcccgacgaggtgcgggccgatccgggcgggttcctcctcgcgttcagcttttgggat
ctgaagaatctcctcgacatccggcccacgggcggggtgtacatctactcgtcgagcgaa
gcgtatggggaggagcaggcgatcgatatgcaccggctttggaactggctccagctcttc
gggttcgaggtccacgggttcgcggtggacgggcacggggagctttcgttcggcgggggg
ctccacgcctccggccacgccagtggggaggagctcctggcgatggcccgcgagattcgg
ccgcggatcttggtgcccctccacaccgaacggccggacctgttcgtcacgggcctgcgg
ggggagccgatcgaggtccgcctcatccccaatggcggctccctttcgctttag
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