Candidatus Bipolaricaulis anaerobius: BARAN1_0550
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Entry
BARAN1_0550 CDS
T05525
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bana
Candidatus Bipolaricaulis anaerobius
Pathway
bana03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bana00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BARAN1_0550 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bana03019
]
BARAN1_0550 (rny)
Messenger RNA biogenesis [BR:
bana03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BARAN1_0550 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
KH_1
KH_KhpA-B
RIC3
DUF16
TctB
DUF883_C
LMBR1
Motif
Other DBs
NCBI-ProteinID:
SQD92574
UniProt:
A0A2X3MKZ6
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All DBs
Position
BARAN1:536131..537750
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AA seq
539 aa
AA seq
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MAWIGWLGAVVWAVPAWAQAQAAKAPVQPGAPFPWLSIGIALAALAVGVALGLLFARLRH
RHVNRRAEVILSEARGEAERVHRERLLLTQHEIEELREREEERLRKKEAELAQLEERLRQ
REDRMEKKVQYLETIEASIRQDEAEVAHLLETGRQLLAEERALLERLSGLTEEEAKEYLL
KLVEAESERYFARKISEVERRTTQEAERRARRILANAVQRYALDYAEEATVTTVPLPSDE
YKGRIIGRDGRNIRAFEALTGIEVLVDDTPEAVVLSSFHPVRREVARIALEKLLEDGRIH
PARIEETVRKAKDRVEEAILEAGEKAAFEVGIELPSDLIQLLGRLHFRTSYGQNQLQHAL
EVSFLARLLAEEIGIDPKPAKRAGLLHDIGKAVDHDVEGPHALIGADLARRAGEPWPIVN
AIAAHHGQAEPATVTAVLVQAADTLSAARPGARQETYERYCQRLEELEKIASAYPLVKEA
YAIQAGREVRVIVRPEKTTDDMAAKLAYDIARRIEEQVQYPGEIKVTVIRQAQFVDTAR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcctggatcggttggctgggagctgtggtgtgggccgtgccggcgtgggcgcaagcc
caggccgcgaaggcgcctgtccagccgggcgcgcccttcccctggctctccattgggatc
gccctcgccgcccttgccgtcggggtagcgctcgggctcctcttcgcccgcctccgccac
cgccacgtgaaccgccgggccgaggtgatcctgagcgaggcccgcggggaagcggaacgg
gttcaccgggagcgactcctcctcacccagcacgagatcgaggagctcagggagcgagag
gaagagcgcctgcgcaagaaggaggccgagctcgcccagctcgaggaacgcctccgccag
cgcgaggaccggatggagaagaaggtccagtacctggagacgatcgaggcctcgatccgc
caggacgaggcggaggttgcccacctcctcgagaccggccgccagctcctcgccgaggag
cgggcgcttttggagcggctgagcgggctcacggaggaggaggccaaagagtaccttctg
aagcttgtggaggcggagtcggagcggtacttcgcccgcaagatcagcgaggtggagcgg
cgcacgacccaggaggcggagcgccgggctcgtcgcatcctcgccaatgctgtgcagcgc
tacgccctcgactacgcggaggaggccacggtcaccaccgtccccctccccagcgacgag
tacaagggacgcatcatcgggcgggacgggcgcaacatccgggcgttcgaggccctgaca
gggatcgaggtcctcgtggacgacacgccggaggcggtcgtcctgtcctcattccacccc
gtgcggagggaagtggcccgcatcgccctggagaagctcctcgaggacgggcggatccac
cccgcccggatcgaggagacggtgcgcaaggcaaaggaccgcgtggaggaggcgatcctc
gaggcgggggagaaggccgcctttgaggtggggatcgaactcccgagcgacctcatccag
ctcctgggccgcctccacttccggacaagctacggccagaaccagctccagcatgcgctc
gaggtgagcttccttgcccggctccttgccgaggagatcgggatcgaccccaagcccgcc
aagcgggcggggctcctccacgacatcgggaaagcggtggaccacgacgtggaagggccg
cacgccctcatcggggccgatctggcccggcgggcgggggagccatggccgatcgtgaac
gcgatcgctgcccaccacggccaggcggagccggcgaccgtgaccgcggtcctcgtccag
gccgcggataccctgtccgcggcccgccccggggcgcgccaggagacctacgaacggtac
tgccagcggctggaggagctggagaagatcgcgtccgcctatcccctggtgaaggaggcc
tacgccattcaggcggggcgggaggtgcgggtgatcgtgcggccggagaagacgacggat
gacatggcggcgaagcttgcgtatgatatcgcgcgccggattgaggagcaggtgcagtac
cccggggagatcaaggtgaccgtcatccgtcaggctcaatttgtggacacggcccgctaa
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