Candidatus Bipolaricaulis anaerobius: BARAN1_0714
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Entry
BARAN1_0714 CDS
T05525
Name
(GenBank) conserved protein of unknown function
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bana
Candidatus Bipolaricaulis anaerobius
Pathway
bana03420
Nucleotide excision repair
bana03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bana00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BARAN1_0714
03430 Mismatch repair
BARAN1_0714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bana03400
]
BARAN1_0714
Enzymes [BR:
bana01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BARAN1_0714
DNA repair and recombination proteins [BR:
bana03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BARAN1_0714
MMR (mismatch excision repair)
Other MMR factors
BARAN1_0714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
SQD92738
UniProt:
A0A2X3KVY1
LinkDB
All DBs
Position
BARAN1:complement(691517..694435)
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AA seq
972 aa
AA seq
DB search
MGMADILSGLTEEQRAAVTYRGGPLLVLAGVGTGKTTVITRRIAHLIAEGIVERPSQLLV
FTFSHQAAEEMLDRAFDWVRYAALDAWVATYHAVGERILRENAPLAGLPPDFRVLDEWDQ
RVFLLDHLTELPVRTLRPRALRQPLRFLTPLLSFIGRAKDDAVSPEAYRAWCDGAAASLP
SDEADLHRELADCYAAYQELLERDGVMDFGDLIVRTVRLLEGRPGLLAEYHQRFPHVLAD
EFQDTSRAELRLIELLAGHGNATAVGDDDQAIYGFRGVPWDNLLAFLRAFPLAKVVVLTQ
NFRSTQGILDAATRLIRANSYRLEALSLRGEIPYSITKELTSIHGPGHPPVHRQFPSVEE
EAEFVAREVRKLNAAGVPYREIALLYRNRYRPDPYLRALSEEGIPWTLAGRFRAGMFDQE
VIRLMMSFLRTLADPGDSQSLYHLLGSPIYRLGGEDLALLTSRSQREHRPLRQVLAAAVA
AGSLSEEGQQAAARALADLAACEDLARGNPAGRVLYAFLMERTGYLQALAQSDDPAAGQA
VEHIAEFFERVVHRFEEVARYDRVPWFVRYVDELRELGWNPMVGEAEPGVDAVQVMTFHQ
AKGMEFVAVFLTGLVEDFFPGRITRPTFVLPRGLRGEDIPEDIAHLEEQRRLFYVGMTRA
KRRLYLLSADDYRPPGEAPRKRMAKVSRFVLEALGEQGERSPEAPALLRIRRQGGEPPPP
APGSEGTGPLQLSFRQVDDWLTCPLKYRYVHVLRVPIRLHPIVILGNAVHQAIQAYHLAK
VQGRTLPLAELEAVFRHAWRSEGFLSAAHEEEMLRHGAAALAAFHRFEEASGAQPTFVEK
FFAFVEGEAKVIGYWDRVDRIGNQALIIDYKTSEVGEEAADHRARESLQLAIYALGYERM
FGDRPHEVQLRFLTPEVVVGRATPTDRLADRALAAIRDATAGIRSGAFAAKPSFAACSSC
AYRTICPSALPL
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
gtggggatggcggacatcctgagcgggctcaccgaggaacagcgggctgcggtcacctac
cgcgggggaccgctcctcgtcctggccggggtcggaacgggaaagacgacggtcatcacc
cgccgcatcgcccacctcatcgccgaggggatcgtcgagcgcccgagtcagctcctcgtg
ttcaccttctcccaccaggcggccgaggagatgctcgaccgggcgttcgactgggtccgc
tacgccgccctcgacgcgtgggtcgcgacctatcacgccgtgggcgagcggatcctgcgc
gagaacgcaccgctcgcgggtctcccccccgacttccgcgtcctcgacgagtgggatcag
cgggtgtttctcctcgaccacctcacggagctgccggtgcgcacgttgcgcccgcgggcg
ctgcgccagccgctccggttcctcacaccgctcctctcgttcatcggacgggcgaaggac
gacgccgtgtcgcccgaggcctaccgcgcgtggtgcgacggggcagcggcctcactcccc
tccgacgaggccgacctccaccgcgagctcgccgactgctatgccgcgtaccaggagctc
ctcgagcgggacggggtgatggacttcggggacctcatcgtgcgcacagtgcggctcctc
gagggccgaccggggctcctcgccgagtaccaccagcggttcccccacgtgctcgccgac
gagttccaggacacaagccgcgctgagctccggctcatcgagctcctcgccgggcacggg
aacgcaactgcggtgggggacgacgaccaggcaatctacgggttccgcggggtgccctgg
gacaacctcctcgccttcctccgcgcgttccccctcgccaaggtcgtggtgctgacccag
aactttcgctcaacccaagggatcctggatgccgcgacgaggctcatccgcgccaattcc
taccgcctggaggctctctccctccgcggggagatcccgtactcgatcaccaaggagctc
acctcgatccacggtccagggcacccccctgtgcaccgccagttcccatcggtggaagag
gaagcggagtttgtggcgagggaagtgcgcaagctgaacgcggccggcgtcccgtaccgg
gaaatagcgctcctgtacaggaaccggtaccgcccggacccttacctgcgcgccctgtcc
gaggaggggatcccgtggaccctcgcgggccggttccgggccgggatgttcgaccaagag
gtcatccggctcatgatgtcgtttctgcgcacgctcgccgaccccggggatagccagtcc
ctctaccatctcctcgggtccccgatctaccgcctggggggggaggacctcgctctcctc
acctctcgctcccagcgggaacaccgcccgcttcgccaggtcctcgccgcggccgtcgcc
gctggctccctgagcgaggagggccagcaggcggccgcacgggcgttggccgacctcgcg
gcgtgcgaggacctcgcgcggggcaacccggccgggcgcgtcctctacgcgttcctgatg
gagcgcaccggctacctgcaggccctcgcccagtccgatgaccccgccgccgggcaggcg
gtcgagcacatcgccgagttcttcgagcgggtggtgcatcggttcgaggaggtggcccgc
tacgaccgcgtgccgtggttcgtgcgctatgtggacgagctgcgggagctggggtggaac
ccaatggtcggggaggcggagccgggggtggacgcggtgcaggtgatgacgttccaccaa
gcaaaggggatggagttcgtggccgtgttcctcaccgggctggtggaggacttcttcccg
gggcggatcacgcggcccacgttcgtcctcccccgcggcctgcggggggaggacatcccg
gaggacatcgcccacctcgaggagcagcggcgcctgttctacgtggggatgacccgcgcc
aaacgccgtctgtacctcctctccgccgatgattaccgtccgccgggcgaggcgccccga
aagcggatggcgaaggtgtcgcggttcgtcctcgaggccctcggcgaacagggggaacga
tcccccgaggcgccggccctgctccggatccgccgccaagggggggaacccccgccaccc
gccccgggttccgagggcacggggccgctccagctctccttccgccaggtggacgactgg
ctcacctgtcccctcaagtaccgctacgtccatgtgctgcgcgtcccgatccgccttcat
ccgatcgtcatcctcggcaacgcggtccaccaagcgatccaggcctaccacctcgccaag
gtccaggggaggaccctccccctcgccgaactcgaggccgtgttccgccacgcctggcgc
tcggaggggttcctgtccgccgcccacgaggaggagatgctccgccacggcgcggccgcc
ctggccgcgttccaccggttcgaggaggcctccggcgcgcagccgacgttcgtcgagaag
ttcttcgctttcgtggagggggaggcgaaggtgatcgggtactgggaccgcgtggaccgg
attggcaaccaggccctgatcatcgattacaagacgtccgaggtgggggaggaggccgcc
gaccaccgggcaagggagtcgctccaactggcgatctatgccctcggctatgagcggatg
ttcggggaccggccccacgaggtgcagctccgcttcctcacgccggaggtggtggtgggc
cgggcgacgccgaccgaccgcctggccgaccgcgccctggccgcgatccgcgatgccaca
gcggggatccggtccggtgccttcgcggcaaaaccctcgttcgctgcttgctcctcctgc
gcgtaccgcacgatctgcccgtccgccctccccctgtga
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