Candidatus Bipolaricaulis anaerobius: BARAN1_0772
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Entry
BARAN1_0772 CDS
T05525
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bana
Candidatus Bipolaricaulis anaerobius
Pathway
bana03030
DNA replication
bana03430
Mismatch repair
bana03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bana00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BARAN1_0772 (dnaE)
03430 Mismatch repair
BARAN1_0772 (dnaE)
03440 Homologous recombination
BARAN1_0772 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bana03032
]
BARAN1_0772 (dnaE)
03400 DNA repair and recombination proteins [BR:
bana03400
]
BARAN1_0772 (dnaE)
Enzymes [BR:
bana01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BARAN1_0772 (dnaE)
DNA replication proteins [BR:
bana03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BARAN1_0772 (dnaE)
DNA repair and recombination proteins [BR:
bana03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BARAN1_0772 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
SPDY
Motif
Other DBs
NCBI-ProteinID:
SQD92796
UniProt:
A0A2X3KZ58
LinkDB
All DBs
Position
BARAN1:complement(760341..763718)
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AA seq
1125 aa
AA seq
DB search
MAFVHLHVHSEYSLLDGMGRVRDLVARAAELGMPALALTDHGNLSGVIKFYRMATEAGVK
PLLGEELYVAPDSRHSRDPATGRSPYHLVALAADETGWQNLLVLANRAHTEGFYYKPRVD
LELLAEHATGLVALSACESGEVQRHLLHGRRDEAAAAAGRYAEIFPRRFYLELQNHGLER
NKALVRDQIALARRLNLPVVASADVHYLSPEDREPHRVLINIQAAKKLSDPDARSFDGDG
YHFLTEEEMRARFAEVPEALAATIAVAEQCELKLDLGRRLLPRYPSVLSPNEELIEQARA
GARARFGDPLPPPVEERLNYELDVITRMNLAPYFLIVADFVGYARRKRIPVGPGRGSAAG
SLVAYALGITQVDPLRFNLLFERFLNPDRVTLPDFDIDFCVRGRDEVIRYVAERYGRDHL
AQIATFDRMAARSVVRDVARVLGLPYEKSDRIAKLVPFKMTLRRALEEVPALKELAEGEE
EMRRLFAIARRLEGQLRNSSTHAAGVVIAPEPLEKFVPLLRLADGEFVTQFDMHDVEAVG
LLKMDFLGLRNLTLLDDVTRLVEKRTGVEVDLGRIPLDDGATYELIQSGQTTGVFQIESP
GMKALIRRLEPTEFRDLIAILGLFRPGPLDSGMADDYIERKHGRQPVTYPHPAAEEVLSE
TYGLPIYQDQILLLAQRLAGFTLGEADLLRRAMGKKKPEEMAEMESRFVDGCVRNGIPIT
EAKKIFSDIEKFARYGFVKAHATAYAFITYWTAYFKAHYPTEFMAALLTSVQDNLDKVAA
YIEECRGMGIEVLPPDVNESAVGFTPVGEGVIRFGLGAIKHVGTGAVEAILASRGAGFRN
FFDFCQRMDPERVSREAVESLIKAGAMDRFGLPRQALMALVYEGMRLAQLTRSQRASGQQ
SFFEAEELAPKLTVEETEFPRETLLEFERELLGLYLSGHPLDAYAAELRARGAIPLADAG
TEGRPFTVAGQVKTLKVVPTQEGPMAFLTLEDPSGEAEVVVGARLYATRAALLRERALLV
LRVRWSERNGSRRLQALDVDPLVPPASSPTHCVIELPLDLATPETAAHLSGILADHPGPV
PARLRLREGERALVVEAGPQYAVQPSPELRQRLAQLGPGVRVEWG
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
gtggcgttcgttcatctccacgtccactcggagtactcgcttctcgatgggatgggccgc
gtgcgcgacctcgtggcccgggcggcggagctggggatgccggccctcgccctcaccgac
cacgggaacctgtcgggcgtgatcaagttctaccggatggcgaccgaggccggggtgaag
cccctcctcggggaggagctctacgtggccccggactcccgccattcccgcgatcccgcg
acgggccgctccccgtaccacctcgtcgccctcgccgcggatgaaacggggtggcagaac
ctcctcgtcctcgcgaaccgcgcccacaccgaaggcttttactacaagccgcgggtggac
ctcgaactcctcgcggagcacgcgacggggctcgtcgccctgtccgcctgcgagtcgggc
gaggtgcagcgccacctcctccacggacggcgggatgaggccgcggcggcggcggggcgg
tatgcggagatcttcccccgccggttctacctcgagcttcaaaatcacggtctggagcgg
aataaggcgctcgtgcgcgaccagatcgcgctcgcccggcgcctgaaccttcccgtggtg
gcgtcggccgacgtccactacctttcccccgaggaccgtgagccgcaccgcgtcctcatc
aacatccaggccgcaaagaagctgtccgaccccgatgcgcggtcgttcgatggggatggc
taccacttcctgaccgaggaggagatgcgggcacggttcgcggaggtcccggaggcgctc
gcggcgaccatcgccgtggcggagcagtgcgagctcaagctcgacctggggaggcgcctc
ctgccccgctacccgagtgtcctctccccgaacgaggaactgatcgagcaggcgcgggcg
ggggcccgggcccggttcggcgaccccctcccgcccccggttgaggagcggctgaactac
gagctcgacgtaatcacgcggatgaacctcgccccctacttcctcatcgtcgctgacttc
gtcggctacgcgcggcggaagcggatccccgtcggtcccgggcgcggctcggccgcggga
tccctcgtggcgtacgccctcggcatcacgcaggtggacccgctgcggttcaacctcctg
ttcgagcgcttcctgaacccggaccgggtgaccctccccgacttcgacatcgacttctgc
gtccggggccgggacgaggtcatccgctacgtcgccgaacggtacggccgcgaccacctc
gcccagatcgccacgttcgaccggatggcggcgcggtcggtggtgcgggacgtggcccgc
gtgctggggctaccctacgaaaagtcggaccggatcgcaaaactcgtcccgttcaaaatg
acgctgcgccgggcgttggaggaggtgccggccctcaaggagctcgccgagggggaggag
gagatgcggcgcctctttgccatcgcccgccggctggaggggcagctccgcaacagctca
acccacgccgcaggggtggtgatcgcccccgagccgctggagaagttcgtgcccctcctc
cgcctcgccgacggggagttcgtgacgcagttcgacatgcacgacgtggaggcggtgggc
ctcctcaagatggatttcctcggcctgcgcaacctgaccctcctcgatgacgtgacgcgg
ctggtggagaagcggacgggggtcgaggtggacctggggcggatcccgctcgacgacggg
gcaacgtacgagctcatccagtccgggcagaccacgggggtgttccagatcgagtccccg
gggatgaaggccctcatccgccggctcgagccgacggagttccgagacctgatcgccatc
ctcggcctgttccgcccaggcccgctcgattcggggatggccgacgactacatcgagcgg
aagcacgggcgccagccggtcacctacccccaccccgccgcggaggaggtcctctccgaa
acgtatggcctccccatctaccaggaccaaatcctcctcctcgcccaacggctggccggc
ttcaccctgggggaagccgatctcctgcggagggcgatggggaagaagaagccagaagag
atggcggagatggagtcccggttcgtggacggctgcgtccggaacgggatccccatcacg
gaggcaaaaaagatcttctccgatatcgagaagttcgcgcggtacgggttcgtcaaggcc
cacgcgaccgcgtacgcgttcatcacctactggaccgcgtacttcaaggcccactacccg
acggagttcatggccgccctcctcacctcggtccaggacaacctggacaaggtggcggcc
tacatcgaggagtgccgggggatggggatcgaagtgttgcccccggacgtgaacgagtcg
gcggtggggttcaccccggtcggggagggggtgatccggttcggcctgggggcgatcaag
cacgtcgggacgggcgccgtggaggcgatcctcgccagccgcggtgcggggttccggaac
ttcttcgacttctgccagcggatggacccggagcgcgtgagccgggaggcggtggagtcc
ctgatcaaggcgggggcgatggaccgattcgggctcccccgtcaggccctcatggccctc
gtctatgaggggatgcgcctcgcgcagctcacccggtcccagcgagcgtcgggccagcag
tcgttcttcgaggcggaggagcttgccccgaagctcacggtggaggagacggagttcccg
cgggagacgctcctcgagttcgaacgggagctcctcggcctctacctctccgggcacccg
ctggatgcctacgccgcggagctgcgggcgcggggggcgatccccctcgccgatgccggg
accgagggccgcccgttcacggtcgcgggccaggtgaaaacgctcaaggtcgtccccacc
caggaagggccgatggcgttcctgacgctcgaggatcccagcggcgaagcggaggtagtg
gtgggggcacgcctctacgccacccgggccgcgctgctccgtgagcgggcgctcctcgtc
ctacgcgtgcggtggtcggagcggaacggatcgcggcggctgcaggccctcgacgtggat
cccctcgtccctccggcgtccagcccgacccactgcgtaatcgagctccccctcgacctc
gccaccccggagacggcggcccacctgagcgggatccttgccgaccaccccggcccggta
ccagcgcggctccggctgcgcgagggggagcgagccctcgtcgtggaggccggcccccag
tacgccgtccagcccagccccgaactgagacagaggctcgcccagttgggccccggggtg
cgggtggagtggggatga
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