Candidatus Bipolaricaulis anaerobius: BARAN1_0996
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Entry
BARAN1_0996 CDS
T05525
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bana
Candidatus Bipolaricaulis anaerobius
Brite
KEGG Orthology (KO) [BR:
bana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bana03032
]
BARAN1_0996 (topA)
03400 DNA repair and recombination proteins [BR:
bana03400
]
BARAN1_0996 (topA)
Enzymes [BR:
bana01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BARAN1_0996 (topA)
DNA replication proteins [BR:
bana03032
]
Prokaryotic type
DNA Topoisomerases
BARAN1_0996 (topA)
DNA repair and recombination proteins [BR:
bana03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BARAN1_0996 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DUF7351
Zn_ribbon_NUD
DZR
DUF7340
zf-tcix
Zn_ribbon_recom
Lar_restr_allev
Toprim_C_rpt
Auto_anti-p27
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
SQD93020
UniProt:
A0A2X3L2H9
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All DBs
Position
BARAN1:complement(999025..1001289)
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AA seq
754 aa
AA seq
DB search
MPKDVVIVESPTKARTLASFLGNEFVVLSSKGHVRDLPEDELGVELNDDFTPKWVVRDRK
LLAELRKKTEDASRVYLATDPDREGEAIAYDLMELLGDGGRYVRVLLHEITPQAVREALL
HPGPIDLAKVEAQRARRILDRLVGYQISPLLSRVLAGRRFEGLSAGRVQSVALRFICDRE
LEIQSFVPEPYWEVAALFPSEPPFAARLDGRLTAPDEVAALTQDLARARFMVEAVEEEEV
LRRPSPPFITSTLQQAASSELGFSPKRTMQIAQSLYEGVAIGGEMVGLITYMRTDSVRVA
DSAIAAARAFVKSEFGAKALSPKPRHFRNKRRAQDAHEAIRPTQVTRTPDEVAPHLAPDQ
RKLYDLIWRRFVASQMADGIWVRRKVTIRAGDRTFRASSSRMISPGFTSVLPVAPLEDEE
ASLPDGLTPGLELPRPEIEVEERTTEPPKRFTEAGIVRKLEQEGIGRPSTYAQIVSVIQD
RGYVVREGSSLRPTLLGHLVTDLLRLYFPETVEEAFTARMESDLDRIQEGDLGRGELLRS
FYRWFSPRLHTVEEALSKGGKPFRALSDVACPSCGAPMEVRVWRGNLYLGCSRYPECRTT
KALPPNVPFRYTSDRVELAAGLSAAESAPATPCPKCGTPMVVRHGRYGRYLSCPSCRTTS
PVPTGVTCPRCGEGELVERFGKRYGTFYACSRYPDCRFLVAGRPIGACPTCGGGVIYEDP
RRGVRCSNALCPTHEDSAPAATRPKQGPAKKRKS
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggatgttgtgatcgtcgagtcaccgacgaaggcccgcaccctcgcctccttc
ctcggcaatgaattcgtcgtcctctcctccaagggacacgtccgcgatctccccgaggat
gagctcggcgttgaactgaacgacgacttcaccccaaagtgggtcgtgcgggaccgcaag
ctccttgccgagctgcgcaagaagaccgaggatgcgtcccgggtctacctcgccaccgac
cccgatcgggaaggcgaggcgatcgcctacgacctgatggagctcctcggcgatgggggc
aggtacgtgcgggtcctcctgcacgagatcaccccccaggcggtgcgggaggccctcctt
caccccgggccgatcgacctcgccaaggtggaggcccaacgagcgcgccggatcttggac
cgactcgttggataccagatcagccccttgctgtcgcgggtgctggcgggccggcggttc
gaaggcctgtcggcgggccgcgtgcagtccgtcgccctgcggttcatctgcgatcgggag
ctggagatccagagcttcgtcccggaaccgtactgggaagtggctgccctgttcccatca
gagcccccgttcgcggcgcgcctcgacggccggctcaccgccccggacgaagtcgcggcc
ctgacccaggatctcgcccgggcgcggttcatggtggaggcggttgaggaggaggaggtc
ctccgtcggccatcgccgccgttcatcacctccacccttcagcaggcggcgtcgagcgag
cttgggttctcccccaaacgcacgatgcagatcgcccagagcctgtacgagggggtggca
atcggtggggagatggtgggccttatcacctacatgcgcacggattccgtgcgcgtggcg
gactcggccatcgccgccgcgcgggcgttcgtgaagtcggagttcggggccaaggcgctg
tccccgaagccccgccacttccggaacaagaggcgggcccaggatgcccatgaggcgatc
cgccccacccaggtcacccgcacgccggacgaggtggcgccccaccttgccccggaccag
cgcaagctctacgacctcatctggcgacggttcgtcgcaagccagatggcagacgggatc
tgggttcgccggaaggtcacgatccgtgccggcgaccggacgtttcgcgcctcctcgtcg
cggatgatctccccggggttcacctccgtgctccctgtggccccgctcgaggatgaggag
gcctccctccccgacgggcttacgcccggcctggagctcccgcgcccggagatcgaggtc
gaggagcgcacgaccgagcccccgaagcggttcaccgaggcggggatcgtgcgcaagctc
gagcaggaggggatcgggcgccccagcacctacgcccagatcgtgtccgtcatccaggac
cgcgggtacgtggtgcgcgaagggagctcgcttcgaccgaccctcctcgggcacctcgtg
accgatcttctgcgcctgtacttcccggagacggtggaggaagcgttcaccgcccggatg
gagtccgatctcgaccgaatccaggaaggcgacctcgggcggggcgagctcctccgttcg
ttctaccgctggttttcgccccgactgcacacggtggaggaggcgctctcgaagggagga
aagccgttccgcgccctgagcgatgtggcttgtccatcctgcggggcgccgatggaggtc
cgcgtgtggcgggggaacctgtacctcgggtgctcccggtacccggagtgccggaccacg
aaggccctcccccccaacgtccccttccgctacacgtcggatcgcgttgaactcgcggcg
ggcctgtccgcggccgagtccgctcccgccaccccctgtccgaagtgtgggacgccgatg
gtcgtccgacacggccgctacgggcggtacctctcctgcccgagctgccggaccacgtcc
cccgtcccgaccggggtcacctgcccccgctgtggagagggggagctcgtggagcggttc
gggaagcgctacggcaccttctacgcctgctcccgctacccggactgccggttcctcgtt
gccgggcgtccgatcggagcctgcccgacgtgcggggggggcgtgatctatgaggacccg
cggcggggcgtgcgctgctcgaacgctctttgccctacccacgaggactccgccccggcc
gcgacgaggccgaaacagggccctgcgaagaagcggaagagctag
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