Bartonella ancashensis: PU02_0843
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Entry
PU02_0843 CDS
T04086
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
banc
Bartonella ancashensis
Pathway
banc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
banc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PU02_0843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
banc03019
]
PU02_0843
Enzymes [BR:
banc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PU02_0843
Messenger RNA biogenesis [BR:
banc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PU02_0843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
FACT-Spt16_Nlob
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ALE03657
UniProt:
A0A0M4LGQ6
LinkDB
All DBs
Position
899700..901073
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AA seq
457 aa
AA seq
DB search
MNIEKENVFTELGLQDCLVKNLLISNISEPKPIQEQAIPVMLKGRDVLGIAQTGSGKTLA
FSLPILSQILTIGDKRCFKGARALILVPTRELAVQIEAAIRSFIKGLHLSTCLILGGMSR
LKQAKRMESGVDILIATPGRLMDLVRARHVDLSQSRFFVLDEADRMLDMGFINDVRCIAK
CLHEQHQTALFSATMPKEITMLADSLLNNPIKIQVVPQGTVAVQITQKLYCVLTSEKKSF
LNKLLENPELISIIVFTRTKHGADSVTRCLKKMGHSVATIHGNKSQNARQNALKAFRKKD
VRILVATDIAARGIDVPGISHVINYDLPDEAESYVHRIGRTGRNGASGDAITLFDENTEK
SRLHAIERVIRMKLTRENISFDSAQFSENSFVREGNKKENHQKKSSLKSEDKKRSPASNG
KIIRLHKGKLSSRYEKMREGIKRSRSLRSRKSKQQAS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
ttgaatattgagaaagaaaatgtttttacagagttaggcttacaagattgtttagttaaa
aatttgcttatttctaatattagtgaacctaagcctatccaagaacaagcaattccggtt
atgttaaagggacgtgatgttttaggtattgcgcagacaggctctggaaagacattggca
ttttcgttgccgattttgagtcaaattttgactataggggataagcggtgttttaagggg
gcacgtgctttaatcttagttcctacacgcgagcttgctgttcaaattgaagcagcgatt
cgctcttttattaagggattgcacctttcaacatgtttgattttgggaggaatgtcgcgt
ctaaaacaagctaaacgtatggaatctggtgttgatattctgatcgcaacaccggggcgt
ttgatggatctagttcgtgcacggcatgttgatttatctcaatctcgtttttttgtttta
gatgaagcagatcgtatgctggatatgggttttatcaatgatgttcgatgtattgcaaaa
tgtttacacgagcagcaccaaacggcactattttctgcaacaatgccaaaagaaattaca
atgttggctgatagtttgcttaataatcctataaaaatacaagttgttcctcagggtact
gtagctgtacaaattacccaaaaattatattgtgttcttacaagtgaaaaaaagagtttc
ttaaataagcttttagaaaatcctgagttaatttcgatcattgtgtttactcggactaaa
catggcgcagatagtgttacacgttgtctgaaaaaaatgggacatagtgttgcaacaatt
cacggtaacaagtcgcaaaatgcccggcagaacgcactcaaagcttttcgcaaaaaagat
gttaggattcttgttgcaactgatattgcagcccgcggtattgatgtaccgggtatcagt
catgttatcaattatgatcttccggatgaggcggaaagttatgtacatcgtattggtcgc
acaggacgcaatggtgcatctggtgatgcgattacgctttttgacgaaaatacagaaaag
tcacgtttgcatgctatagagcgcgtaatccgtatgaaattaactcgtgaaaatatttcc
tttgattctgcacaattttcagaaaattcttttgtaagagaaggtaataagaaggaaaat
catcaaaaaaaatcttccttaaaaagtgaagataagaagcgatctcctgcgtctaatggt
aaaatcatacggttacacaaaggaaaattatcatccagatatgaaaaaatgagagaaggg
ataaagcgttctaggtcattacggtctcgtaaatctaaacaacaggcttcctaa
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