Bartonella ancashensis: PU02_0984
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Entry
PU02_0984 CDS
T04086
Name
(GenBank) Ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
banc
Bartonella ancashensis
Pathway
banc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
banc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PU02_0984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
banc03019
]
PU02_0984
03009 Ribosome biogenesis [BR:
banc03009
]
PU02_0984
Enzymes [BR:
banc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
PU02_0984
Messenger RNA biogenesis [BR:
banc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PU02_0984
Ribosome biogenesis [BR:
banc03009
]
Prokaryotic type
rRNA processing factors
PU02_0984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
ALE03798
UniProt:
A0A0M5KUN3
LinkDB
All DBs
Position
1057939..1060254
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AA seq
771 aa
AA seq
DB search
MSNKMLIDASHPEETRVVVVQGNKIEELDFESEHKKQLKGNIYLARITRVEPSLQAAFVE
YGGNRHGFLAFSEIHPDYYQIPITDRLALIEREEKAASHEDDLYGLDEEKNQHKKKSKKR
NEASVAVNVESSTASKMVIADDVEDSFDTQTADDDIEVVNAEDSFEEIFSYQRKQERQYK
IQEVIKRRQILLVQVIKEERGNKGAALTTYLSLAGRYSVLMPNTARGGGISRKITNVQDR
ERLKEIVKGLAVPKGMGVILRTAGANRTKAEIKRDYEYLMRLWETVRTLTLKSTAPCLVH
EESNLIKRSIRDLYNKNIDEILVSGEQGYREAKDFMRMLMPSHAKVVQPYNDPVPIFTRN
DIETQLDKMLHPHVSLKSGGYLVINQTEALVSIDINSGRSTKEHSVEKTALQTNLEAAEE
IARQLRLRDLAGLIVIDFIDMVENRNIRLVEKKLKDCLKNDRARIQVGRISHFGLMEMSR
QRIRISVLESTMQPCPHCSGTGNIRSASSIALHVMRSIEEYLLHNSQHSIIVRTPVTTAL
YVLNHKRHVLVDLEKRFNLSINIEADDTIGTQHLVISKGTPIKDDIFAVISENNDTAKIK
VVPNVEKEVAVDEPSVKNNQQRRRKNYQNEVHEEETQNDEESHRRGRRGNRRNQKNGFRS
PRIPYAEAVGDFAKQALAEIKATMRRRRYVPNAEPVGFSENANDKEQNISSKTNGHKSKK
REVFPEKTPAQISEADEQPITKEESPKNKLIASFARKFKKRKTNESVHKQS
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaaaatgctcatagatgcctctcatccagaggaaacacgtgttgttgtcgtt
caaggcaacaaaattgaagaacttgacttcgaatcagaacataagaagcagctcaagggg
aatatttacttagcacgtatcacacgtgtagaaccttcgcttcaagcagcttttgtagaa
tatggtggtaaccgtcacggttttttggcgttttcagaaattcatcctgattattaccaa
attccgattactgatcgcctcgcccttattgaaagagaagaaaaagctgcttctcacgaa
gatgatctttatggtcttgatgaagaaaaaaatcagcataaaaaaaaatcgaaaaaaaga
aatgaggcttctgttgctgtaaatgttgaaagtagcactgcatctaagatggtaatagct
gatgatgtagaggattcttttgatacgcaaactgccgatgatgacattgaagtcgttaat
gcagaagactcttttgaagagatcttctcttatcaacgcaagcaagagcgtcaatataaa
attcaagaggttattaagcgacgtcaaattttgttggtgcaggttatcaaagaggaacgt
ggtaataagggagcagcgcttacaacttatttgtctcttgcaggccgctattctgttttg
atgccaaatacggcacggggtggtggtatctcacgaaaaattaccaatgtgcaagatcgt
gaacgcctcaaagaaatcgtaaaaggattggctgttcctaaaggaatgggggtaattttg
cgaacagctggagcaaatagaacaaaggctgaaattaaacgtgactacgaatacctcatg
cgattgtgggaaactgttcgcactttaactcttaaatcaacagctccctgtcttgttcat
gaagaaagtaatttgatcaagcgttctattagagacctttataataaaaatattgatgag
attctcgtatctggagagcaaggctaccgtgaagccaaggattttatgcgcatgcttatg
ccaagtcatgcaaaagttgttcaaccttacaatgatcctgtacctattttcacacgcaat
gatatcgaaacgcaacttgataaaatgttgcatccacatgtttctcttaaatctggcggt
tatctcgttattaaccaaacagaggctcttgtttctattgacataaattctggtcgttct
acaaaagagcattctgttgaaaagacagcgctacaaactaatctggaagctgctgaagaa
atagcacgtcagctacgtcttcgtgatttagctggtttaatagtaatcgattttattgat
atggttgagaatcgtaatattagactcgtcgagaaaaaattaaaagattgcttgaaaaat
gaccgtgctcgcattcaagttggtcgcatttctcactttggtcttatggaaatgagccgt
caacgcattcgcatatcagttttagaaagtacaatgcaaccctgccctcattgctctgga
actggtaacatacgctctgcatcttcaatcgctttacacgttatgcgctcaattgaggag
taccttttacacaattctcaacatagtatcattgtgcggacacctgtaacaacagctctt
tacgtgcttaatcacaaacgtcatgttctcgttgatttagaaaaacgctttaatttgagt
attaacatcgaagcggatgatactattggaacgcagcatctcgttatttctaaaggaact
cctataaaggatgatatttttgcggtaatatctgaaaataacgatacagcaaaaattaaa
gttgttccaaacgtggagaaggaagttgccgtagatgagccatccgtaaaaaataatcaa
caacgtcggcgtaaaaattatcaaaacgaggtccatgaagaagaaacccaaaatgatgaa
gaatctcaccgtcgtggacgtcgtggaaatcgtcgtaatcaaaagaatggctttcgttca
cctcgtattccttatgcagaagcagttggagattttgctaaacaagccttagcagaaatt
aaagcaacaatgcgtcgtcgtcgctatgttccaaacgcagagcctgttggatttagcgaa
aatgcaaacgataaagaacaaaatatttcttcaaaaaccaatggccataagtctaaaaag
cgtgaagtttttcctgaaaaaacacccgcacaaatttctgaagctgatgaacaaccaata
acaaaagaagagtctcctaaaaataaactcatcgctagctttgctcgcaaatttaaaaag
agaaaaaccaatgaatctgttcacaaacaatcgtag
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