Bartonella ancashensis: PU02_1096
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Entry
PU02_1096 CDS
T04086
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
banc
Bartonella ancashensis
Pathway
banc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
banc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PU02_1096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
banc03021
]
PU02_1096
03400 DNA repair and recombination proteins [BR:
banc03400
]
PU02_1096
Enzymes [BR:
banc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PU02_1096
Transcription machinery [BR:
banc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PU02_1096
DNA repair and recombination proteins [BR:
banc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PU02_1096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RPOC_hybrid
FAM83
Motif
Other DBs
NCBI-ProteinID:
ALE03910
UniProt:
A0A0M5KSR8
LinkDB
All DBs
Position
complement(1184841..1189052)
Genome browser
AA seq
1403 aa
AA seq
DB search
MNHEVMNLFNPQVLAQTFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYRGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLRS
LPSRISTLLDLALKDIERVLYFENYIVTEPGLTSLKLHQLLSEEEYMLAVDEFGEDQFTA
MIGAEAIYDLLSSMELDKIAGNLRVELAATTSEIKQKKLIKRLKIVENFIESGNRPEWMI
MKTIPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIVRNEKRM
VQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKRLVEKEHPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGAPVIVPSQDMVLGLYYLSIVSEKEPGEGMAFSDMGELYYALE
NKVVTLHTKIKGRFKNVDKDGKEVAKLYDTTPGRLIIGELLPKNPNISFDIVNQEMTKKN
ISKMIDQVYRHCGQKETVVFCDRIMQLGFSHACRAGISFGKDDMVIPDSKPRLVAETESL
VKEYEQQYNDGLITQGEKYNKVVDAWGKCTDRIADEMMRRIQAIKFDPQTGRQQQMNSIY
MMSHSGACGSANQMKQLAGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDAIILAVDCGTVKGLTMQPIIDAGQIVATLGQRILGRT
ALLDILHPVSGEVILEGGAMIEESDVARIEEAGIQSVQIRSALTCETRLGVCARCYGRDL
ARGTLVNQGEAVGVIAAQSIGEPGTQLTMRTFHLGGTAQVVDSSYFEASYEGKVELRNRN
VVRNSEGHLVVMGRNMAVLIKDEAGKERAVHRISYGARIFVDDGDMIKRGQRIAEWDPYT
RPVLTEVDGYVAFEDMLDGLSVTETTDESTGITKRQVIDWRANPRGAELKPAIVIHTDKK
DGSIAKLQKGGEARYMMSVETILSVEPGSYVKAGDVIARLPMESAKTKDITGGLPRVAEL
FEARRPKDHAIIAEISGTVRFGRGYKNKRCIIIEPDDNTLEAVEYLIPKGKLFHLQEGDQ
IEKGDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQK
VEITESGDSDYIPGDHVDRIELDEINDHLIAEGKRPASGNPILLGITKASLQTPSFISAA
SFQETTRVLTEAAVSGKIDTLQGLKENVIVGRLIPAGTGGAIAQIHRIATVRDDLIVDEQ
HKSRNDDASKVLLADMTENTLSE
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacgaggttatgaatcttttcaatcctcaagtactagcacagacattcgattct
attcgtatttcaattgcgagtcctgagaagattctgtcttggtcttatggtgaaataaaa
aaaccagagactattaattatagaacatttaaaccagagcgtgacggtcttttttgtgcg
cgtatttttggtcctattaaagattatgagtgcttatgtggtaaatataagcgtatgaaa
tataggggtattatttgcgaaaaatgtggtgtggaagttactctttcacgtgtacgacgt
gaacgtatggggcatatagagcttgcagcaccagttgcgcatatttggtttctaagatca
ttgccaagtcgaatttctacccttttagatttagctttaaaagatatagagagggttctt
tattttgagaattatatcgtaacagagccgggtttaacatcccttaagctgcatcagctg
ctttcagaagaagaatatatgcttgctgttgatgaatttggagaggatcaattcacagcc
atgataggcgcagaggctatttatgatcttctttcttcaatggagttagataaaatagcg
ggaaacttgcgtgttgagttagcagcgacaacttcagaaataaagcaaaagaagttgatt
aaaagacttaaaattgtcgaaaattttattgaatccggcaatagaccagagtggatgata
atgaaaacgattccggtaattccaccggatttgcgtccattggttcctctagatggtggt
cgttttgcaacatcagatttaaatgatctttaccggcgtgttataaaccgtaataatcgt
ttgaaacgtcttattgaattgcgtgcccctggaatcattgtgcgtaatgagaagcgtatg
gttcaggaagcggttgatgctttatttgataatggtcgtcgcggtcgtgttataacagga
gcgaataaacgtccgttaaagtcactctcagatatgttaaagggaaaacagggtcgtttt
cgtcagaatttgctagggaagcgggttgattattcaggacgttctgtcatcgttacgggt
cctgagttaaaattgcatcagtgtggtcttcctaaaaaaatggctctcgaattgtttaag
ccgttcatttacgctcgtcttgatgcgaagggttattcatcgacggtaaaacaagcaaag
agacttgttgagaaggagcatccggaagtttgggatattttggatgaggttattcgtgag
catcctgttttgcttaatcgtgcgccaacacttcaccgtttaggaattcaagcttttgag
cccgtattgattgaaggaaaagcgatacagcttcatccattagtttgtacggcttttaat
gcggattttgatggtgatcagatggcggttcacgttcctctttcacttgaagcacagctt
gaggctcgtgtcttgatgatgtcaacgaacaatattcttcatccagccaatggtgcgcca
gttattgttccgtctcaggatatggttctcggtctctattatctctctattgtttcagag
aaagaaccaggtgaagggatggctttttctgatatgggagagttgtattatgctttggag
aataaggtcgtaactctccatacgaagattaaaggtcgtttcaagaatgtggataaagat
ggaaaggaagttgctaagctttatgacacaacacctgggcgcctaattattggtgagctc
ttaccaaaaaatccaaatatttcgttcgatatcgttaatcaggaaatgactaaaaagaat
atttccaagatgattgaccaagtctacaggcactgtggacaaaaggagacggttgttttt
tgtgatcgtattatgcaacttggtttttctcatgcctgtcgtgcagggatttcatttggt
aaggatgatatggtcattcctgatagtaaacctcgtttagttgctgaaacggaatctttg
gttaaagaatatgagcagcagtataatgatggtctgattacacaaggagagaaatataat
aaggttgtagatgcttgggggaaatgtactgaccgcatcgcagatgaaatgatgaggcgt
attcaggctatcaaatttgatccccagactggccgtcagcagcaaatgaattcaatttat
atgatgtcacattctggtgcatgtggttctgctaatcaaatgaaacagttagctggtatg
cgtggattgatggcaaaaccatcaggcgaaattattgaaacgccaatcatttcgaatttt
aaagagggtttaactgttaacgagtattttaactcgacccatggtgcacgtaaagggtta
gcagataccgctctaaagactgcaaattccggttatttgacacggcgtcttgttgatgtt
gcacaggatgctatcattctagctgtcgattgtggaactgtaaaagggcttacaatgcag
cctatcattgatgcagggcagattgttgcaactcttggtcaaagaattcttggtcgtaca
gcgcttttggatattttgcatccagtatctggtgaggttattcttgagggcggagcgatg
attgaagaatctgatgttgcgagaattgaagaagcagggattcagtctgttcagattcgt
tcagctttgacatgtgaaactcgtcttggtgtttgtgctaggtgttatggtcgtgatttg
gcacgtggaacgcttgttaatcagggtgaggccgttggtgttattgcagctcaatccatt
ggtgagccggggacacagcttactatgcgtacttttcacttaggtggaacagcacaggtt
gttgattcatcttactttgaagcgtcgtatgagggtaaggtagaacttcgtaaccgtaat
gtcgttcgcaattctgaaggacatttagtggttatggggcgtaatatggctgttcttatc
aaagatgaggctggcaaagaacgtgctgtgcatcgtatcagttatggtgcacggatcttt
gttgatgatggtgatatgattaaacgtggtcagcgtatagctgagtgggatccttatact
cgtccggttttaacagaggttgatggttatgtggcgtttgaggatatgcttgatggttta
tcagttactgaaacgactgatgaatccactgggattacaaaacgtcaggttattgattgg
cgtgctaatccacgtggtgctgaacttaagcctgcaatcgttatccatacggataagaaa
gatggtagtattgccaagctgcagaaaggtggagaagcacgttatatgatgtcggtggaa
actattctttctgttgaaccaggttcttatgtcaaggcaggtgatgttattgcgcgttta
ccgatggaaagtgctaaaacaaaagatattacaggtggtttaccgcgtgtggctgaactt
tttgaagcacggcgtccgaaggatcatgctatcattgctgagattagtggtacagtacgg
tttggtcggggatataagaacaaacgttgtatcatcattgaacctgatgataatactctt
gaagcggtagaatatttaattccaaaagggaagttgttccatctgcaagaaggtgatcaa
attgaaaagggtgattatattcttgatggtaatccggctcctcatgatattttagctatt
aagggtgttgaagctttagcgtcttaccttgttaatgaaattcaggaagtttatcgcttg
cagggtgttttgattaatgacaaacacatcgaagtcattgttcgtcagatgctacaaaaa
gtggaaattactgaatcgggtgattctgattacattccgggggatcatgttgatcgcatt
gaattagatgagattaatgatcatctcatcgcagaaggcaaaaggcctgcttctggtaat
cctattcttcttgggattacgaaagcatctctccagacaccatcttttatctcagcggca
tcatttcaggaaacaactcgggttcttactgaggcagcagtttctggaaaaattgatact
ctgcaaggccttaaagaaaatgttattgttggtaggcttattcctgcaggtacgggaggt
gcaatcgctcagattcaccgtattgctactgttcgtgatgatttgatcgtggacgaacag
cacaaatccagaaatgatgatgcatctaaggtgttattggccgatatgacggaaaatact
ctttctgaatga
DBGET
integrated database retrieval system
