Bifidobacterium angulatum: BBAG_0093
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Entry
BBAG_0093 CDS
T03930
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bang
Bifidobacterium angulatum
Pathway
bang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBAG_0093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bang03021
]
BBAG_0093
03019 Messenger RNA biogenesis [BR:
bang03019
]
BBAG_0093
Transcription machinery [BR:
bang03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BBAG_0093
Messenger RNA biogenesis [BR:
bang03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BBAG_0093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
SAP
Spore_III_AA
FANC_SAP
Motif
Other DBs
NCBI-ProteinID:
BAQ95715
LinkDB
All DBs
Position
129385..131349
Genome browser
AA seq
654 aa
AA seq
DB search
MANSQDLESMKLPELKELAKQMGLRGTSTMRKPELLATLQAARSGGEAPAGVTVKAPKTS
APKASEPVEGKSEKTAEAKSKKQSDAAPAQADTAENTTRRDRTAAKDKAHEAVDLLATLD
LDAAKEGDRKERKPRRRIHDELDGEELIAGNVRRRRHRKDQDAPSEETARDLDDILASLP
GGKQESRNDGESYRGREERGERENREGRDGRDRRGRRLRGRNRDFDERDERRNRNERNDR
NDRNADNAENDNRDAARNERNDRNDRNEQQADLVPVAGIVDVLESYAFIRTSGYLPGPND
VYVSMGQVKKYGLRKGDAVHGAIRAPREGERRNQRQKFVPLQSIDSINGMSVEESMGRPQ
FNKLTPLYPQERLKQETTPNKLTGRIMDIISPIGKGQRGLIVSPPKAGKTITLQNIANAI
TTNNPEVHLMVVLVDERPEEVTDMERTVQGEVISSTFDRPASDHTIVAELAIERAKRLVE
LGQDVVVLLDSMTRLARAYNIAAPASGRILSGGVDAQALYPPKKFFGAARNIENGGSLTI
ISSALVETGSKMDEVIFEEFKGTGNMELRLSRELAEKRMFPAIDVNASGTRREELITDPK
ELPIIYRLRRLFGGMEAEQAYQTLVPRLKKTASNRDFLAAIVQQANASNATNGN
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
gtggccaatagccaagatcttgagagcatgaaattgccggagctgaaggagcttgccaag
cagatgggactgcgcggcacttccactatgcgcaagccggagctgcttgctacgcttcag
gccgctcgttccggcggcgaagcgcctgccggtgtcactgtaaaagctccgaagaccagc
gctccgaaggcctctgaacctgtggaaggcaagagcgagaagactgccgaggccaaatcc
aagaagcagtccgacgccgcacctgctcaagcggatactgcggagaataccacccgtcgc
gaccgcaccgccgcaaaggataaggcgcatgaagccgtggatctgctggccacgctggat
cttgacgctgcgaaggaaggcgatcgcaaggagcgtaagccgcgtcgccgcattcacgat
gagcttgatggtgaggaactgatcgccggcaacgtgcgccgtcgtcgtcatcgcaaggat
caggatgcgccgagcgaggagaccgcgcgcgatcttgacgatattcttgcgtccctgccg
ggcggtaagcaggaatcccgcaacgatggggaatcgtatcgtggccgtgaagagcgcggc
gagcgtgagaaccgcgagggacgcgacggacgcgaccgtcgtggccgtcgtctgcgtggc
cgcaaccgtgatttcgatgagcgcgacgagcgccgcaatcgtaacgagcgtaacgaccgt
aacgaccgcaacgcggacaatgcagagaacgacaaccgcgatgccgcacgcaacgagcgt
aacgatcgcaatgatcgcaatgaacagcaggccgatctcgtgccggtcgccggtattgtc
gacgtgctggaatcctacgcattcatccgtacctccggctatctgccgggtccgaacgac
gtgtacgtttccatgggccaggtcaagaagtacggtctgcgcaagggcgacgccgtgcat
ggcgccattcgcgcaccgcgcgagggcgagcgccgcaaccagcgtcagaagttcgtgccg
ctgcagtccatcgattccatcaacggcatgagcgtcgaggaatccatgggccgtccgcag
ttcaacaagctcaccccgctgtacccgcaggaacgcctgaagcaggagaccacgccgaac
aagctcaccggccgcatcatggatatcatctccccgatcggcaagggtcagcgtggcctg
atcgtatcgcctccgaaggccggcaagacgatcaccttgcagaacatcgccaacgccatc
accaccaataatcctgaagtgcatctgatggtcgtgctggtggacgagcgccccgaggaa
gtcaccgatatggaacgtacggtgcagggcgaggtcatttcctccaccttcgaccgcccg
gcatccgatcacaccatcgtggccgaactcgccatcgaacgtgccaagcgcctggtggag
cttggccaggatgtggtcgtgctgcttgattccatgacccgtctggcccgtgcctacaat
atcgcggcaccggcttccgggcgtattctgtccggcggtgtggatgcccaggcgctgtac
ccgccgaagaagttcttcggcgccgcccgcaacatcgaaaacggcggctccctgaccatc
atctcctccgcgctggtggaaaccggttccaagatggatgaggtgatcttcgaggaattc
aagggcaccggcaacatggaactgcgtctgagccgcgaactggcggaaaagcgcatgttc
ccggccatcgatgtgaacgcctccggcacgcgccgcgaggagctcatcaccgatccgaag
gagctgccgatcatctaccgtctgcgtcgtctgttcggcggcatggaagccgagcaggcc
taccagaccctggtgccgcgcttgaagaagacggcatccaaccgcgacttccttgccgcg
atcgtgcagcaggccaacgccagcaacgccaccaacggcaactga
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