Bifidobacterium angulatum: BBAG_0289
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Entry
BBAG_0289 CDS
T03930
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bang
Bifidobacterium angulatum
Pathway
bang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBAG_0289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bang03019
]
BBAG_0289
03016 Transfer RNA biogenesis [BR:
bang03016
]
BBAG_0289
Enzymes [BR:
bang01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BBAG_0289
Messenger RNA biogenesis [BR:
bang03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BBAG_0289
Transfer RNA biogenesis [BR:
bang03016
]
Prokaryotic type
tRNA degradation factors
BBAG_0289
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
Pyruv_OxRed_insertion
PCB_OB
KH_NusA_1st
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
BAQ95911
UniProt:
C4FH89
LinkDB
All DBs
Position
388670..391351
Genome browser
AA seq
893 aa
AA seq
DB search
MEGPEIKAAEAVIDNGSFGKRTLRFETGRLAQQADGAVAAYLDDDTMILSTTTAGSSPKE
NYDFFPLTVDVEEKMYAAGKIPGSFFRREGRPSSEAILACRIIDRPLRPLFPHTLRNEVQ
VVETILAVNPQDAYDVIALNAASASTMISGLPFEGPVSGVRLALIDGQWVAFPTWDQRER
AVFEIVVAGRVIENGDVAIAMIEAGAGKNAWHLIYDEGQTKPDEEVVAGGLEAAKPFIKV
ICEAQNELKEKAAKETKEFQLFPEYTDELYSRIDEIAHKDLDEALTIAEKLPRQDRIKEI
KEGVKATLANEFEDMDDAEKDKEIGNAFKELQRQIVRRRILTEDYRIDGRGLRDIRTLSA
EVDIVPRVHGSALFQRGETQILGVTTLNMLKMEQQLDSLSGPQSKRYMHNYEMPPYSTGE
TGRVGSPKRREIGHGALAEKALVPVLPSREEFPYAIRQVSEAIGSNGSTSMGSVCASTLS
LLAAGVPLKAPVAGIAMGLVSGDVDGKHIFKTLTDILGAEDAFGDMDFKVAGTSEFITAL
QLDTKLDGIPADILAAALQQAKEARTTILEVINECIDGPSEMSEFAPRIITTTVPVDKIG
EVIGPKGKMINQIQEDTGAEIAIEDDGTVYISSEGGEAAEKAKQIIDQIANPHVPEAGET
YNGKVVKTTSFGAFVNLTPGTDGLLHISQIRNLANGERIDAVEDVLQEGDTVEVVVQGVD
DRGKISLAIPGFEDQESNSGRGGREDRGERGGRGGRGRRDDRRDDRRDDRRSRDDRRDDR
DYEDRPRRNRHEDRDNDRDYEDRPRRRRSYDDRDDRDRDYEDRPRRRRSYDDRGDRDRDY
DRDDRRSRGGRRGSDRNPRYATDDNYDDYRSEREERTERPRRRVRRDFDPFED
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcccgaaatcaaggccgcagaggccgttatcgataacggttcattcggtaag
cgcacgctgcgcttcgaaaccggtcgtcttgcccagcaggctgacggcgcagtcgccgcc
tacctggacgacgacaccatgatcctgtccaccaccaccgccggttccagcccgaaggag
aactacgatttcttcccgctgaccgttgacgttgaagagaagatgtatgcagccggcaag
atccccggctccttcttccgccgcgaaggccgtccgagctccgaagccatcctcgcctgc
cgtatcatcgatcgtccgctgcgcccgctgttcccgcacaccctgcgcaacgaggtgcag
gtcgtcgagaccattctcgccgtcaacccgcaggatgcctacgatgtgatcgcgctgaac
gcggcatccgcatccaccatgatctccggtctgccgttcgaaggcccggtctccggcgtg
cgcctggcgctcatcgacggccagtgggtcgccttcccgacctgggatcagcgtgaacgc
gccgtgttcgagatcgtggtcgccggccgtgtcatcgagaacggtgacgtcgccatcgcc
atgatcgaggcaggcgcaggcaagaacgcctggcacctcatctacgacgaaggccagacc
aagccggatgaggaagtcgttgccggtggcctggaagccgccaagccgttcatcaaggtc
atctgcgaagcccagaacgagctcaaggagaaggccgccaaggaaaccaaggaattccag
ctcttcccggagtacaccgacgagctgtactcccgcatcgacgagatcgcgcacaaggat
ctcgatgaggccctgaccatcgccgagaagctgccgcgtcaggatcgcatcaaggagatc
aaggaaggcgtgaaggccaccctcgccaacgagttcgaggatatggacgatgccgagaag
gacaaggaaatcggcaacgccttcaaggagctgcagcgccagatcgtgcgtcgccgcatc
ctgaccgaggactaccgcatcgacggccgtggcctgcgcgacatccgcaccctgtccgcc
gaagtggacatcgtgccgcgcgtgcacggttctgcgctcttccagcgcggcgaaacccag
atcctgggcgtcaccacgctgaacatgctcaagatggaacagcagcttgactccttgtcc
ggcccgcagtccaagcgttacatgcacaactatgagatgccgccgtactccaccggcgaa
accggtcgtgtcggttctccgaagcgccgcgagatcggccacggcgccctcgccgagaag
gcgctggtgccggtgctgccgagccgcgaggagttcccgtacgccatccgccaggtctcc
gaggccatcggctccaacggttccacctccatgggctccgtgtgcgcatccacgctgtcg
ctgctcgccgccggcgtgccgctgaaggctccggttgccggcatcgccatgggcctggtg
tccggcgatgtggacggcaagcacatcttcaagaccctgaccgacattctgggcgccgag
gacgccttcggcgatatggacttcaaggtcgccggcacctccgaattcatcaccgccctg
cagctcgacaccaagctggacggcattccggccgacattcttgccgctgccctgcagcag
gccaaggaagcccgcaccaccatcctcgaagtcatcaacgagtgcatcgacggcccgtcc
gagatgagcgagttcgctccgcgcatcatcaccaccaccgttccggtggacaagatcggc
gaggtcatcggcccgaagggcaagatgatcaaccagatccaggaggacaccggcgccgag
atcgccatcgaggacgacggtaccgtctacatctcctccgaaggtggagaggccgccgaa
aaggccaagcagatcatcgaccagatcgccaacccgcacgttccggaagccggcgaaacc
tacaacggcaaggtcgtcaagaccacgtcgttcggcgctttcgtgaacctgaccccgggc
accgacggtctgctgcatatcagccagattcgcaacctcgccaacggcgagcgcatcgac
gccgtcgaagacgtgctgcaggaaggcgacaccgttgaggtcgtcgtgcagggcgttgac
gatcgcggcaagatcagcctggccatcccgggtttcgaggatcaggaatccaactccggc
cgtggcggtcgtgaggatcgcggcgagcgtggcggtcgtggcggccgtggccgtcgtgac
gatcgccgtgatgaccgtcgtgacgatcgccgttcccgcgatgatcgccgtgacgaccgt
gattacgaggatcgtccgcgtcgcaaccgtcacgaggatcgcgacaacgatcgtgattat
gaggatcgtccgcgtcgtcgtcgttcctatgatgaccgcgatgaccgtgatcgtgattat
gaggatcgtccgcgtcgtcgtcgttcctatgacgaccgtggcgaccgtgaccgcgattat
gaccgcgatgaccgccgcagccgtggtggccgccgtggctccgaccgcaacccgcgttac
gcgaccgacgacaactacgacgattaccgttccgagcgcgaagagcgcaccgagcgtccg
cgccgtcgtgtgcgccgcgactttgatccgttcgaagactga
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