Bifidobacterium angulatum: BBAG_0883
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Entry
BBAG_0883 CDS
T03930
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bang
Bifidobacterium angulatum
Pathway
bang03420
Nucleotide excision repair
bang03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBAG_0883
03430 Mismatch repair
BBAG_0883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bang03400
]
BBAG_0883
Enzymes [BR:
bang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBAG_0883
DNA repair and recombination proteins [BR:
bang03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBAG_0883
MMR (mismatch excision repair)
Other MMR factors
BBAG_0883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
CarD_TRCF_RID
Viral_helicase1
GIPC1_GH1
Motif
Other DBs
NCBI-ProteinID:
BAQ96505
LinkDB
All DBs
Position
complement(1113122..1115734)
Genome browser
AA seq
870 aa
AA seq
DB search
MEQEPELIARTADELVGDLNKQQSEAVQYRGAALLIGAGAGSGKTRVLTRRIAWILSQFG
AWPSQILAITFTNKAAAEMRERLTALIGPVAQRMWVSTFHSACVRILRRDGKALGLKSGF
SIYDSADSERLVKIIATEFNVDVKRYTPRSILGRISDYKNQLIGWRAQLAAYAPDFKPGS
RNYRISKFDNVEELYAIIYAEYEHRLAMANAVDFDDLIVRTVELLRDHPDVADYYRHKFR
YILVDEYQDTNHAQYVLIRELAGVDAGETPAPTATAAGRQGPAWVTVVGDSDQSIYAFRG
ADIRNIQDFEEDFPNAKTILLEQNYRSTQTILDAANAVISHNEGRKPKKLWTAVGKGEPI
VGYAADNAQQEAVWVASEIARLHAEDGVAYSDMAIMYRANAQSRSLEEALINAGLPYQLI
GGTKFYERKEIKDALAYLQAILNPADDVNLRRILNVPKRGLGARAESIVLEYARERGTSF
FDALMHMEQIEDMPTRTAKGLKAFRDLMASMSAFARANINKPSDIVAEVLAKSGLLEELQ
KSVDPQDQSRVENLSQLQSTAAEYEQNTPDATLGGFLETTALVADSDQLPNGNEDSGKVT
MMTLHTAKGLEYPVVFLTGLEQGTFPHSRSLEDTAELSEERRLAYVGITRAKRRLYITRA
AVRAQWGQANEMLPSQFLEEIPDELIDWKRRETGSERMRTGWGDGDEFGGWDDEDDFSSG
PTFGTASYGSYGSSHGSAYGSGSTGRWGSAAHRSNGSRSGSTYGSGRSSGTYGSSSRYGS
HSSGTRGGRISTRHVTPKSGGTSMPVSSLQKDNGLNIGDFSIGDYVTHDQYGLGKVVDLQ
DKGRNSVITIDFGSDGVKRLMLRVAPIEKL
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
gtggaacaggaaccggagctgatcgcacgtaccgccgacgaactcgtaggcgatctcaac
aagcaacagtccgaagcggtgcagtaccgtggtgccgcactgctgatcggcgccggcgca
ggatcgggcaagacgcgtgtgcttacacgccgcatcgcttggattctcagccagttcggc
gcctggccaagccagattctcgccatcaccttcaccaataaggccgccgccgagatgcgc
gagcgtcttaccgcgctgatcggtccggttgcgcagcgcatgtgggtgtccacgttccat
tccgcctgcgtgcgcattctgcgccgcgatggcaaggctcttggtctgaaatccggtttc
tccatctatgattccgccgattcggagcgcttggtcaagatcatcgccaccgagttcaac
gtggatgtcaagcggtatacgccgcgttcgatcctcggacgtatctccgactacaagaac
cagctcatcgggtggagggcgcagctggccgcgtatgctccggatttcaaaccgggaagc
agaaactacagaatcagcaagttcgacaatgtcgaagaactgtatgccattatctacgcc
gaatacgagcaccgtctcgccatggcgaacgccgtcgatttcgacgatctgatcgtgcgc
accgtggaactgctgcgggatcatcccgatgtcgcggactattaccgtcacaagttccgt
tacattctggtcgacgaatatcaggacaccaatcatgcgcagtatgtgctgatccgtgag
ctggcgggcgtggacgcgggggagacaccggcgcctacggcgactgccgctggcaggcag
gggccggcgtgggttaccgtggtgggtgattccgaccagtccatctatgcgttccgtgga
gcggacatccgcaatattcaggatttcgaagaggattttcccaatgcgaagacgattctg
cttgagcagaactatcgatccacgcagaccattcttgatgcggccaatgcggtgatctcc
cataatgagggccgtaaaccgaagaagctgtggacggcggtcggcaaaggcgagccgatc
gtcggctatgccgcggataacgcgcagcaggaggcggtgtgggtggcttccgaaatagcg
cgtctgcacgccgaggacggcgttgcctattcggatatggccatcatgtatcgcgccaac
gcacaatcccgttccctggaagaggcgctgatcaatgccggattgccttaccagctcatc
ggtggtaccaaattctacgagcgcaaggaaatcaaggatgcgctggcttatctgcaggcc
attctcaatcctgccgacgatgtgaatctgcggcgtatcctcaatgtgcccaagcgtggt
ctcggcgcacgcgccgaaagcatcgtgttggaatacgcccgcgaacgtggcaccagcttc
ttcgatgcgctgatgcatatggaacagatcgaggacatgcctacccggacagccaagggg
ttgaaggcgttccgtgatcttatggcgtcgatgtcggcctttgcgagagctaacatcaat
aagccaagcgacatcgtggccgaggtgttggcgaaatccggtctgcttgaggaactgcag
aagtcggtcgacccccaggaccagtcccgggtggagaacctttcccagctgcagtccacc
gcagctgaatacgaacagaacacgcctgacgccacgctcggcggtttccttgaaaccaca
gcgctggtggcggattcggaccagctgcccaacggcaacgaggactccggcaaggtgacg
atgatgactctgcatacggccaagggcctggaatatcccgtagtgttcctgaccggcctt
gaacagggcacattcccgcattcccgttcgttggaagacactgcggaactgtccgaggaa
cgccgactcgcatacgtcggcattacgcgtgccaagcgccgattgtatatcacgcgcgcc
gcggtcagggcgcaatggggacaggctaacgaaatgttgcccagccagttccttgaggag
atccctgacgagctgatcgattggaagcgccgcgaaaccggttcggaacgcatgcgtacc
ggctggggcgatggcgacgaattcggcggctgggacgacgaagacgatttttcctccggt
ccgactttcggcacggcatcgtatggttcgtatggctcatcccatgggtctgcgtatggt
tccggttccacggggcgttggggttccgcggcacatcgctccaatggttcgcgttcgggc
tccacgtacggttccggacgttcctccggaacatatggttcgtcgtctcgttacgggtcg
cattcgtccggtacgcgcggcggtaggatcagcacgcgacatgtcacgccgaagagcggc
ggcacaagtatgccggtctcgtcgctgcagaaggacaatgggctgaatatcggtgatttc
tccattggcgactatgtcacccacgaccaatacggattgggcaaggttgtggatttgcaa
gacaaggggcgtaattccgtgatcacgatcgatttcggttccgatggcgtcaaacgtctc
atgctgcgtgtcgcaccgattgaaaagctgtaa
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