Bifidobacterium angulatum: BBAG_1227
Help
Entry
BBAG_1227 CDS
T03930
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bang
Bifidobacterium angulatum
Pathway
bang03420
Nucleotide excision repair
bang03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBAG_1227
03430 Mismatch repair
BBAG_1227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bang03400
]
BBAG_1227
Enzymes [BR:
bang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBAG_1227
DNA repair and recombination proteins [BR:
bang03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBAG_1227
MMR (mismatch excision repair)
Other MMR factors
BBAG_1227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
AAA_30
UvrD_C_2
XdhC_CoxI
DEAD
Motif
Other DBs
NCBI-ProteinID:
BAQ96849
UniProt:
C4FGD5
LinkDB
All DBs
Position
complement(1552596..1556462)
Genome browser
AA seq
1288 aa
AA seq
DB search
MSTFTDSPEQAKVINAPVGSDVLVVAGAGSGKTYTMTRRIVSLIEHGVAPERILGLTFTR
KAAGELLSRVSAAVLADDEHDQDRMFLKPAVFTYDAFFQSIVRQYGLLVGFDQNTQPLSE
AGALQLAANTVERHMDMLQGKGLGSFSQVTAHVRALSDAIASSMIGGDVADMPSAIAKVR
AWDDAFVKQVRSVIEGEDIPEQAVKLKRQKRLKKDTDESWAQKVASYQRDAHAACVYTCA
SLVQTAEQRNVMLDLVEAYAAEKRRLNMAEFSDFTIAAYQLVTRFPSIGARYRKRFSHVL
LDEYQDTSTTQAALIATLFRGEGTAVSAVGDPFQSIYAWRGASPGAFRMFQRDFHLPPER
KPYSLSVTRRNAKLVLEAANNLTMPLRGTPSRPSSSPMREVDVNELAPLDNAPSGTVGVL
GYETLGQEIDGVVRFCHEAIARNTHAGQSGEHKGSVAVLFRSKAKMPLFQQALEQSGLSA
VAVGYSAMLERPEVRDILSLLRVACDHSDSASLMRLLATPRFGLGATALAALAGIANTLN
LESQYRALVMAGLVPADAPRGQWDALVREHRDSVINSVFVADLLLRDDLPEQLERCSRID
EHDARTIIRAGAVLRTVCDAIGRPLSDVVRTATQALELDVDAVVAQALHGDGTVNPTVAR
IPVEAIIDLVDTYLSEIAAGQAPTLRGFMAWTDTLRTIEDETSTLNADSGADVELMTIHQ
SKGLEWDAVAVVELGEGVFPSKQGDSLAVKVDERHPGGWHDGVWEAPEYCETATSWLTTI
DAVPVPVRADAGILPRFPHDAPGEADPIESLELLDAAETIDDEVFGTLRAFDDEIGAMDP
DSLYLTQVEEYGRRYHCDERRLAYVALTRARRDLLLTYCQTGEEGRDPRVLGAKTRKSKP
SVFWQEVHDSLRIHNDIATTPSNLPEGADEQIALPEGYFVGDHAREYEDMVVGAAWLEEP
ETHDAQTSLPWPARLSREVGDSLLQSAKQVRQAMTGADADDAASNATSDVDCHNPENNGQ
SLYDKARMLVADEDLMTGMLDGDALDAAVRRKAQRVMAASRQSVTGLQALAGGLSGRDET
RFWRGIIRPIPSVASPAASAGTRFHAWAERFMNAMHPEESGESRSGMLQELDKAVQACQS
GDADSSVLEWERRLASSAWAQRVPVWAERQIVVSIGDLNGQVVNGKLDAVFFGGLDPQDR
TKRFTIVDWKTGHRPTSSEDTARKLLQLDMYRLLLAEIENVPLEAIDATLYYVSEADESL
RELHAEMKPRNAIIAELGAGVPQASDDD
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgagcacattcaccgatagtccggaacaagccaaagtcatcaacgctccggtcggcagc
gacgtgcttgtggtcgccggtgcgggatcaggcaaaacctacaccatgacgcgtcgcatc
gtgtcgctcatcgagcatggcgtggctcccgaacgtattctcggcctcaccttcacccgt
aaggcagcgggcgagctgctgtccagggtctccgcggcggtgcttgccgatgacgagcat
gatcaggatcgcatgttcctcaaacctgcggtgttcacctatgacgcgttcttccaatcc
attgtgcgccagtacggtctgctcgtgggcttcgaccagaacacacagccgttgagcgag
gccggggcgttgcagctggcggccaatacggtcgaacgtcatatggatatgctgcagggc
aagggactcggttcattcagtcaggtcacggcgcatgttcgcgcgctaagcgatgccatt
gccagttctatgatcggcggcgatgtcgccgacatgccttcggccatagcgaaagtgcgc
gcctgggatgacgctttcgtcaagcaggtgcgatccgtcatcgaaggcgaggatattccc
gaacaagcggtgaaactcaagcgtcagaagcggttgaagaaagacacggacgaaagctgg
gcgcagaaggtcgcctcatatcagcgtgacgcgcatgcggcctgcgtctacacgtgcgcc
tcgcttgtgcagaccgccgaacaacgcaacgtgatgctcgatctggtagaggcctatgcc
gcggagaaacgacggctgaatatggcggaattcagcgatttcaccatcgccgcataccag
ctcgtcactcgtttcccctccatcggggcccgctatcgcaaacggttcagccatgtgctg
ctcgacgaataccaggacacatccaccacgcaggcggcgcttatcgccaccctgttccga
ggcgaaggcaccgctgtgagcgcggtgggcgaccccttccaatcgatctatgcctggcga
ggagcaagccccggcgctttccgcatgttccaacgcgattttcatctgccacccgaacgc
aagccgtattccctaagcgttacccggcgcaatgcgaagctggtactggaagccgcgaac
aatctcaccatgccgttgcgtggcacgccaagccgtcctagcagttcgccgatgcgggaa
gtggacgtgaacgagctcgcccccttagacaatgccccatccggcacggttggcgtgctc
ggctacgagaccttggggcaggagatcgacggtgtggtgcgattctgccatgaagccatc
gcgcgcaacacccatgccggccagagtggcgaacataagggaagcgttgcggtgctgttc
cgttcgaaggcaaaaatgccgttgttccagcaggcgctggaacagtccggtctgagcgct
gtggcggtcggatattccgcaatgctcgaacgccccgaagtgcgcgatattctctcgctg
ctgcgcgtagcctgcgaccatagcgacagcgcctcgctgatgcggctgctcgccacccca
cgcttcggactgggagccacggccctggccgctcttgccggtattgccaatacgctgaat
cttgaatcccaatatcgagccctggtcatggccggtctggtcccggcggacgcgccgcgc
gggcaatgggacgctctggtccgagaacatcgcgatagcgtgatcaacagcgtgttcgta
gccgatctgctgctgcgcgacgatctgccggaacagttggaacgctgctcccgcatcgac
gaacacgatgctcggacgatcatccgcgccggcgccgtgctgcgcacggtgtgcgacgcg
atcggcaggcccttgtcggatgtggtgcgtaccgcgacgcaggcgctggaactggacgtg
gatgccgtggtcgcgcaggcgttgcatggcgacggcacggtaaaccccactgtcgcccga
atccccgtggaggccatcatcgatctggtggacacgtacctatcggagatcgcggccggt
caggcgccgacattgcgcggattcatggcgtggacggatacgctgcgaaccatcgaagac
gagacgtccaccctgaacgccgatagcggtgccgatgtcgaactcatgacgatccaccag
tccaaagggcttgaatgggatgcggtcgcggtggtggaactcggcgaaggcgtgttcccc
agcaagcaaggcgattcgcttgccgtcaaggtcgacgaacgccatccgggcgggtggcac
gacggcgtgtgggaagctccggaatactgcgagaccgccacgtcatggctgacgacaatc
gacgcggtccccgtgccggtgcgcgccgatgccggcattctgccacgattcccgcatgat
gcgcccggcgaagcggatcccatcgagtccttggaactgctggacgcggcggaaaccatc
gatgacgaagtgtttggcacactgcgtgccttcgatgatgagatcggagccatggatccg
gattccctgtaccttacacaggtcgaggaatacgggcgccgctaccattgcgatgaacga
cgactcgcctacgtggcgctcacccgagctcgcagggatctgctgctcacctattgccag
actggagaggaagggcgcgacccgcgcgtattgggcgccaaaacgcgaaaatccaagccg
tcggtgttctggcaggaagtgcatgactcgttgcgcatccataacgatatcgcgacaact
ccatcgaacctgccggaaggggccgatgagcagatcgccttgccggaagggtactttgtg
ggcgatcacgcccgcgaatacgaggatatggtcgttggcgcggcctggctggaagaaccc
gaaacgcacgatgcccaaaccagtcttccctggccggcgcgtctcagccgggaagtgggc
gactcgctgctgcaaagcgcaaaacaggtgcggcaggccatgaccggagctgatgcagac
gacgccgcatccaatgccacatcggatgtggattgccataatcctgaaaacaatgggcaa
agcctatacgacaaggcccgcatgttggtagcggacgaggatctgatgaccggcatgctg
gacggtgacgccctggatgcggcggtcagacggaaagcccaacgcgtcatggccgcttcc
aggcagagcgtaaccggattgcaggcgctcgccggcgggttgagcggtcgggatgagaca
cggttctggcgtggcattatccgcccgataccatccgtggcgtcccccgcggcctcggcc
ggcacgagattccatgcctgggcggagcgtttcatgaacgccatgcacccagaggaaagc
ggagaatccagaagtggcatgctgcaggagctggataaagccgtacaagcctgccagagc
ggcgacgcggattcgtccgtgctggaatgggagcgtcgccttgcctcgtcggcttgggcg
caacgcgtgccggtctgggcggaacgccagatcgtcgtatccataggcgatctgaacggt
caggtggttaacggcaagctggacgccgtgttctttggcgggcttgacccgcaggatcgg
acgaaacggttcaccatcgtcgattggaagacggggcatcgcccgaccagtagtgaagac
accgcccgcaaactcctccaactcgacatgtaccgtctgctgctcgccgaaatcgagaac
gtaccgttggaagccatcgatgccacgctgtattacgtgagcgaagccgacgagtcgtta
cgcgagttgcatgctgaaatgaagcctcgcaacgccatcatcgccgaattgggggcaggt
gttccgcaagcgtcggacgatgactag
DBGET
integrated database retrieval system
