Bifidobacterium angulatum: BBAG_1577
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Entry
BBAG_1577 CDS
T03930
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bang
Bifidobacterium angulatum
Pathway
bang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBAG_1577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bang03019
]
BBAG_1577
03400 DNA repair and recombination proteins [BR:
bang03400
]
BBAG_1577
Enzymes [BR:
bang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBAG_1577
Messenger RNA biogenesis [BR:
bang03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BBAG_1577
DNA repair and recombination proteins [BR:
bang03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BBAG_1577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RQC
ResIII
SecA_DEAD
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
BAQ97199
UniProt:
C4FD59
LinkDB
All DBs
Position
2012324..2013976
Genome browser
AA seq
550 aa
AA seq
DB search
MLMADITGWALRTLQHFYGYDSFRGRQLDVITAILQHRDVLAVMPTGAGKSICYQIPACA
PGINGKPALVLVITPLRALMRDQVAHLSTHGIPAAFIDSETTGTERAMTYQAAREGHIRL
LYVAPERLVSPEFLRFAQTLRIRLVAVDEAHCVFQWGQDFRPDYLGIAAFIEQLPERPVI
AACTATATPTVREGIIQNLHLQDPLQVISNFDRPNLYFGRYEAHSKQDRTACITQYAKTH
RSESGIVYCTSRARTEELTEALKTAGVQAKYFHAKMDEAGKAYVQDAFLEGRLKVIVATT
AFGMGVDKPDVRWVINDGAPSSLEEYYQEAGRAGRDGKPASCYVIWGSYEFDWQRQRIEE
SAGSALDNQQERSQAKDAALDRCQAMERYCTTHGCLRAHMLRYFGEEPSERRCGSCDFCT
GSSRLAGAAHTRNSTPAVFGRTSAFHVEQSEEEHAIDADLMQSVLHFIQAVYRDQGTGYS
TVKIVNALHGSRSVSIMGSGLNQIDGYGSLADTSGTRIRAAIRMLLDDGQLTHGNHGIIL
PGSLEGSTNL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcttatggcagatatcaccggatgggcattgcgcaccctgcagcatttctacggatac
gattccttccgtggccggcagctggacgtgattacagcgattctgcagcatcgagacgtt
ctggcagtcatgcccacaggtgccggcaaatcaatctgctaccagattccggcctgtgca
ccgggcataaacggcaaaccggccctggtactcgtcatcacaccactgcgtgcgctcatg
cgtgatcaggtagcacatctctcaacgcacggaatccccgccgcattcatcgattcggag
accaccggtaccgagcgtgccatgacctatcaggcggccagagaggggcatatacgcctg
ctctacgtcgctccggaacgtcttgtctcccccgagttccttcgcttcgcacagaccctc
agaatccgcttggtggcggttgacgaggcccactgcgtattccaatggggccaggatttc
cggccggattatctcggcatcgccgcattcatcgaacaattgccggaacgaccggtcata
gccgcatgcactgcaacagcaacccctaccgtacgtgaaggcatcatccagaacctgcat
ctacaggatcccctgcaggtcatttccaactttgaccgcccaaacctatacttcggccga
tacgaagcacactccaagcaggatcgcaccgcatgcatcacgcaatatgccaaaacacat
cgcagcgaaagcggcatagtctactgcacatcgcgcgcacgaacagaggagttgacggaa
gcgttgaaaaccgccggggtgcaggccaaatatttccacgccaaaatggatgaggcaggc
aaggcatatgttcaggatgcgtttcttgaagggcgactcaaagtcatcgtcgccaccacc
gcattcggcatgggcgtcgacaaacccgacgtgcgatgggtcatcaatgacggcgctccc
agcagccttgaagagtactaccaggaggccggccgcgcagggcgagacggcaagcctgcc
agctgctatgtgatctggggatcttacgaattcgattggcaaagacagcgcatcgaggaa
tccgccggctcggccctggataatcagcaggaacgcagtcaggccaaggatgcggcactg
gaccgttgccaagccatggaacgctactgcaccacgcatggttgcctacgggcgcatatg
ctgcgctattttggtgaagaaccatctgaacggcgttgcggatcctgcgatttctgtaca
ggatcaagcaggctggcgggcgcggcgcatactcgaaacagcacgcctgcagtgttcggg
cgcacatcagcgtttcacgtggaacaatccgaagaggaacacgccatcgacgccgatctt
atgcaatccgtgctgcatttcatccaagccgtgtaccgtgatcaaggcaccgggtacagc
actgtcaaaatcgtcaatgcattgcatgggtcgaggagtgtatcgattatgggaagtggc
ctgaatcagattgacggctacggttcgctggcggatacaagcggtacccggattcgcgcc
gccatacgaatgctattggatgatggccagcttacccacggaaatcatgggattattctt
ccaggttcacttgaaggttcgacgaacctatag
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integrated database retrieval system
