Bacillus anthracis HYU01: HYU01_08285
Help
Entry
HYU01_08285 CDS
T03394
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
banh
Bacillus anthracis HYU01
Pathway
banh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
banh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HYU01_08285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
banh03019
]
HYU01_08285
Messenger RNA biogenesis [BR:
banh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HYU01_08285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Raco_middle
pre-PUA_NIP7
Motif
Other DBs
NCBI-ProteinID:
AIF55952
LinkDB
All DBs
Position
1539664..1541337
Genome browser
AA seq
557 aa
AA seq
DB search
MKSLKNNLSIVALGGVNEIGKNMYAIQYENDIVVIDCGSKFPDESLLGIDLIIPDVTYLQ
ENKEKIRGLVVTHGHEDHIGGIPYFLKQLNVPIYATRLTLGLIEIKLKEHNLQNDTELIV
IHSESEIDFGSIKTTFFKTNHSIPDCLGIAFHTPEGTVVHTGDFKFDLTPVNNQQPDIHK
MAKIGSEGVLALLSESTNAERPGFTPSERSVGERIEEIFMKANRKVIISTFASNVNRVQQ
IVEACIKTNRKLALLGRSMVNVVEVALEKGYLNIPDGMLIEASEVNRLDPKQVAILCTGS
QGEPMAALARLASGNYRQVDVLPEDTVIIAATPISGNERNVSRIIDNLFALGAKVIYGSG
SSTGVHVSGHAYQEELKLMLALMKPKYFIPIHGEFRMLHHHSLLAESIGVEKENIFIVRN
GDVVDISNEVAIQSRKIQAGNIYVDGLGIGDVGNALLRDRKQLSEDGMLVIVITFNKADG
DIISGPDIISRGFVYVRDSEEFLKELNKLAVITINNLKKEKVNSWGILKREVREALGKYI
YTNTKRKPMILPIIIEV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
ttgaagtcattaaaaaacaacttgtctatcgttgctttaggcggagtaaatgaaataggg
aaaaatatgtatgctattcaatatgaaaatgatattgtcgttattgattgcggatctaaa
tttccagatgaaagtttattaggaattgatttaatcattccagacgtcacatacttacaa
gaaaataaagaaaaaattcgcggattagtagtaacgcatggacatgaagatcatattggc
ggaataccatattttttaaaacaactaaacgtaccaatctatgcgacgaggttaacgtta
ggtttaattgaaattaaattaaaggaacataaccttcaaaatgatacagaattaatcgtt
attcattcagaatcagaaattgattttggttctattaagacgactttttttaaaacgaat
catagcattccagattgcctcggtattgctttccatacaccagaaggtactgtagtacat
acaggtgattttaaatttgatttaacaccagtaaataaccaacagcctgatattcataaa
atggctaaaataggtagtgaaggcgtgctagctttactatctgaaagcacaaatgcagaa
cgaccaggatttactccatcagaaaggtcggtaggggagcggatagaagaaatatttatg
aaagcaaataggaaagtgattatttctacttttgcttctaatgtgaatcgtgttcagcaa
atagttgaagcttgtataaaaacaaatcgaaaactggctttgctcgggagaagtatggta
aatgtagtagaagttgctctagagaaagggtatctaaatattccagatggtatgttaatt
gaagcaagtgaggtaaatcgtttagatccaaagcaggtagcaatcctttgtacaggaagc
caaggagaaccaatggcagctttagcgcggttagctagtggaaactataggcaagtggat
gttttaccagaagatacggttattatagcggcaacgcctatttcgggaaatgaacgtaac
gtttcacgaattatagataatttattcgcattaggagcaaaagtaatttatggatcaggt
agttctactggagtccatgtatctggtcatgcgtatcaagaagaattgaaattaatgctt
gcgttaatgaagccaaaatattttatccctattcatggagaatttagaatgctacatcat
cacagtttgttagcagaatcaataggtgttgaaaaagagaatatctttatcgttcgtaat
ggagatgttgtagatataagtaatgaagtggcaattcaatctagaaaaatacaggcagga
aatatatatgtagatggattaggaattggtgatgttggaaatgccttattacgtgatcga
aaacaactttcagaagatggaatgcttgttatagtgattacttttaataaagcggatgga
gatataatttcaggtccggatattatatctcgtggatttgtctatgttcgtgattcagaa
gaatttttgaaggaattaaataaattagctgttattacgattaataatttaaagaaagag
aaagtgaatagctggggtattttgaaaagagaagtaagagaagctttagggaagtatata
tatacgaatacgaaaagaaagccgatgattcttcctataataatagaggtgtaa
DBGET
integrated database retrieval system
