Bifidobacterium animalis subsp. lactis Bl12: BL12_03785
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Entry
BL12_03785 CDS
T02712
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bani
Bifidobacterium animalis subsp. lactis Bl12
Pathway
bani03030
DNA replication
bani03430
Mismatch repair
bani03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BL12_03785 (holA)
03430 Mismatch repair
BL12_03785 (holA)
03440 Homologous recombination
BL12_03785 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bani03032
]
BL12_03785 (holA)
03400 DNA repair and recombination proteins [BR:
bani03400
]
BL12_03785 (holA)
Enzymes [BR:
bani01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BL12_03785 (holA)
DNA replication proteins [BR:
bani03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BL12_03785 (holA)
DNA repair and recombination proteins [BR:
bani03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BL12_03785 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DNA_pol3_delta
Mn_catalase
Motif
Other DBs
NCBI-ProteinID:
AGO52226
LinkDB
All DBs
Position
890758..891720
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AA seq
320 aa
AA seq
DB search
MTAATLCLLIYGGDEYLNEQNARDAVYRLLEEHRDAELARVDARSADANSFDEAVSPSLL
SQRSVVWVEHAEDADSGLLDAIVAYANETNRDPEASPVVMQCAATLKGRSVEALMRRNNI
PVDTVPKLDKAKDKLNYVYQQFQSRGRRIDPQAAQQLVNVLGDHVGELAAMIRQLCFDFD
DDPMRVNRVNQYLTGNPKVTGFNVADLAMGGKTARAVIALRSALAQGTEPIALIGALALQ
MRNLAKAAAIRQGDISKTKAAVNEWALRTANGRLGGWTSQGISACMQRLAWADEQCKSRG
GDPIYALENTIELIGAKGIQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagcaacactatgcctgctcatctacggtggcgatgagtacctgaacgaacag
aacgcccgggatgccgtgtatcgcctgcttgaggaacatagggatgccgaattggcacgc
gtcgacgcccgcagcgccgacgccaactccttcgacgaggcggtgagtccctccctgctc
tcgcagaggtcggtggtgtgggtcgaacatgcggaggacgccgactccggactgctcgac
gccatcgtggcctacgccaacgaaacaaaccgggacccagaagcgtcgccggtggtgatg
caatgcgccgcaacgctaaaaggccgttccgtggaagcgctcatgcgccgcaacaacatt
cccgtcgacacggttcccaaactcgacaaggccaaggacaaactcaactatgtgtaccag
cagttccaatcgcgtggcaggcgcatagacccgcaggccgcacagcaactggtcaatgtg
ctcggcgaccatgtgggagagctggccgccatgatcaggcagctatgcttcgacttcgat
gacgacccgatgcgagtgaaccgtgtgaaccaatacctcacagggaaccccaaggtcacc
ggcttcaacgtggccgacctcgccatgggcgggaaaaccgcacgtgcagtgatcgccctg
agatccgcgctcgcccaaggaacggaaccgattgcactcatcggcgcgctcgcgttgcaa
atgcgcaacctcgccaaagccgcggccattcgtcaaggggacatctcgaaaaccaaggcg
gcggtgaacgaatgggcgctgcgaacggccaacggacgtctgggagggtggacatcgcag
ggcatcagcgcctgcatgcaacgactcgcctgggcggacgaacaatgcaagagccgcgga
ggcgaccccatatacgcacttgagaacaccatagaactcatcggagccaaaggaatccaa
tga
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