Bifidobacterium animalis subsp. lactis Bl12: BL12_04725
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Entry
BL12_04725 CDS
T02712
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bani
Bifidobacterium animalis subsp. lactis Bl12
Pathway
bani03420
Nucleotide excision repair
bani03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BL12_04725
03430 Mismatch repair
BL12_04725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bani03400
]
BL12_04725
Enzymes [BR:
bani01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BL12_04725
DNA repair and recombination proteins [BR:
bani03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BL12_04725
MMR (mismatch excision repair)
Other MMR factors
BL12_04725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
SidE_PDE
Sec8_N
Motif
Other DBs
NCBI-ProteinID:
AGO52401
LinkDB
All DBs
Position
complement(1080693..1083416)
Genome browser
AA seq
907 aa
AA seq
DB search
MPQDVDFIARPPQELIGDLNEQQAQAVQYRGPALLIGAGAGSGKTRVLTRRIAWILTQFG
AWPSQVLAITFTNKAAAEMRERLGALIGGVADRMWVSTFHSACVRILRRDGEQIGLKSGF
TIYDTADCERLIKLVCADFNIDIKRFTPRSILARISDYKNQLTDASTALAQYAPDFKPGM
RHYSFGQIGDPEPVYAVVYAEYQYRLALANAVDFDDLIVRTVELLRTQPHVAEYYRHKFR
YILVDEYQDTNHAQYVLVRELAGVDAHEPSDPMATEAGKSGPAWVTVVGDSDQSIYAFRG
ADIRNIQDFEKDFPDARTIMLEQNYRSTQTILDAANAVIAHNSARKPKKLWTALGEGDKI
IGYAADTAQLEAHWIAQQILHLHEEKGLPYSDMAIMYRANAQSRSLEEGLIQAHIPYQLI
GGTKFYERREVKDAIAYLQAIVNPADDINMRRILNVPKRGLGTRAESQLTLFANEHNQTF
WWAIEQLEDIEGMSARTANAVRAFRELMTSLRTFAGEHDSKPSEIVAQVLEQSHMLELLR
KSEDPQDESRVENLSQLQSVAAEFEQNTPDTTLAGFLETTALVADSDQLPGEGHDSGKVT
LMTLHTAKGLEYPIVFLTGMEQGTFPHSRAMENMDELSEERRLAYVGITRAKRRLYLTRA
AVRAQWGRQSEMMPSQFLDEIPDSLIDWKRREAGMERMRSGWRNDGFDDGFSDEFGGWDD
GDSDYGAGSYGRSSYGSSGRSRTSSGSAFGSHAYGSSGTASNAAAGTGWGSAATFKSSSG
QTAYGSGSYSSGRSRGSGSSTGAYGAHRSHGGSSSSRSSASRSGAVHTRHTTAKTPQSQG
MPISQIAADNDLNIADFHVGDRITHDRFGLGKVVQTQDKGKNSVITVDFGSTGVKRLMLR
LAPIEKL
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
ttgccacaggacgttgatttcatcgcccgtccaccccaagagctcatcggcgatctgaac
gagcagcaggcccaggcggtgcagtaccgtgggcccgctctgctgatcggcgccggcgcg
ggatcgggaaagacgcgcgtactcacgagacgcatcgcgtggatcctcacccaattcggg
gcatggccaagccaagtgctggccatcaccttcacgaacaaggcggcagccgaaatgcgc
gaacgtcttggcgcattgatcggcggcgtggccgatcgcatgtgggtctccacgttccac
tctgcgtgcgtgcgcatcctgcgtcgggacggtgagcagatcggtctcaaatctggcttc
accatctacgacaccgcggattgcgagcgtctcatcaagctcgtctgcgctgacttcaat
atcgacatcaaacgcttcaccccgcgatccatcctcgccagaatcagcgactacaagaac
cagctcaccgatgcgagcacggccttggctcagtatgctcccgatttcaaacccggcatg
cgtcactattccttcggccagataggcgatccggagccggtgtatgcagtggtctatgcc
gaataccagtatcgtctcgccctggcgaacgccgtggatttcgacgatctgatcgtgcgc
acggtggagctgctgcgaacccagccgcatgtcgccgaatactaccgccataaattccgc
tatattctcgtcgacgaataccaggacacgaaccatgcccaatatgtgctcgtgcgtgag
cttgcgggtgtggatgcccatgaaccaagtgatcccatggccacagaggccggaaagagc
gggccggcgtgggtcactgtggtgggtgattccgaccagtcgatctacgcattccgcgga
gcagacatacgcaacatccaggatttcgagaaggacttcccggatgcgcgcacgatcatg
ctcgaacagaactaccgttccacgcagacgattctcgatgccgcgaatgccgtgatcgcc
cacaacagtgcgcgcaagccgaaaaaactgtggaccgcactcggcgaaggcgacaagatc
atcgggtacgcggccgacaccgcacaactcgaggcgcattggatagcccaacagattctc
cacctgcatgaggagaagggattgccttacagcgacatggcaatcatgtatcgagcgaat
gcccagtcccgttcccttgaggaggggctcattcaggcgcatattccgtaccagctcatc
ggaggcacgaagttctatgagcgtcgtgaggtcaaggacgccattgcctacctgcaggca
atcgtgaacccggcggatgacatcaacatgcgccgcatcctcaacgtgcccaagcgaggc
cttggcacgcgtgcggaatcacaactcacgctgttcgcgaacgagcacaaccaaacgttc
tggtgggcgatcgagcagcttgaggacatcgagggcatgagtgcccgtacggcgaatgcg
gtgcgcgccttccgtgaactcatgacgtcgctgcggacattcgccggagagcatgactcc
aagcccagcgagattgtggcgcaggtgctcgagcagtcgcatatgctggagctgctgcgc
aaatccgaggatccgcaggatgaatcgcgtgtggagaacctttcccagctgcagtcggtg
gccgcggagttcgagcagaacacgccggataccacccttgcaggcttccttgagaccacc
gcgctggtcgctgattcggaccagttgccgggggagggccatgacagcggcaaggtgacg
ctgatgacactgcatacagccaagggcctggaatacccgattgtgttcctcacgggcatg
gagcagggcaccttcccacattcgcgcgccatggagaacatggatgagctctccgaggaa
cgcaggctcgcctacgttggcatcacgcgtgcaaagcgcaggctgtacctgacacgcgca
gccgtgcgcgcgcagtgggggcgtcagagcgaaatgatgccgagccagttcctcgacgag
atcccggattccctcatcgactggaagcgtcgcgaagccggtatggagcgtatgcgttcc
ggctggcgcaacgatggtttcgacgacggcttctccgacgaattcggcggatgggatgac
ggggattctgattatggtgcaggctcctatgggcgctcgagctatgggtcctcgggccgc
tcccgcacttcctcggggtcggctttcggttcccacgcctacggttcctcgggtacggcg
tcgaatgccgctgcaggcaccgggtgggggagcgccgcgacgttcaaatcgagttcgggc
cagactgcatatggttcgggatcgtattcctcgggccgctcgcgaggctccggatcctct
acgggtgcatatggagcccaccggtcgcatggaggttcctcatcatcccgttcctcggct
tcccgttcgggtgccgtgcataccaggcacaccactgcaaagacacctcaatcacaggga
atgcccatttcgcagattgccgccgacaatgatcttaatatcgcggatttccatgtggga
gacaggatcacccatgaccgtttcggattgggcaaggtggttcagacgcaggacaagggc
aagaactcggtgatcactgtagatttcggctccacaggtgtcaagcgacttatgcttcgt
ctggcacccatcgagaagctgtag
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