KEGG   Bifidobacterium animalis subsp. lactis Bl12: BL12_05470
Entry
BL12_05470        CDS       T02712                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
bani  Bifidobacterium animalis subsp. lactis Bl12
Brite
KEGG Orthology (KO) [BR:bani00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bani03400]
    BL12_05470
Enzymes [BR:bani01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BL12_05470
    5.6.2.6  RNA 3'-5' helicase
     BL12_05470
DNA repair and recombination proteins [BR:bani03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BL12_05470
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr WH3_Lhr Helicase_C ResIII AAA_25 Cas3-like_C_2 DUF6406 PhoH
Other DBs
NCBI-ProteinID: AGO52540
LinkDB
Position
complement(1260495..1265168)
AA seq 1557 aa
MCECMAMFSEPTRVWFSRVFGEPTEAQRLAWPAIGRRENVLVIAPTGSGKTLSAFLFAID
SLLSRSAADHARKGVRVLYISPLKALGVDVAKNLDVPLAGIREQIDALGSHAPQVTVATR
SGDTTPKERRAIMSHPPDILVTTPESLYLMLTSKARGILKTVDTVIVDEVHAVAGTKRGA
HLALSLERLDDLLERPAQRIGLSATVNPPERAAKFLAGALPVTVIATGGKPALDITVVEP
AKTLGDGPVANGRRKGGAGEVGSTSAPMTGVTPAMQRLAERKARERDGQGDPQSATTGET
TKRWGDSLPPGTPVSEGAHNPSGVKSAWPAIQRHILDEILSHRTTLVFVNSRGLCERLTA
QINDLHAQRLGKRNPVELPTSETDEPAHYHSTYGSTTMKVGAHGPDEQIAMAHHGSVSKD
RRKQIEERLKSGRLRCVVATSSLELGIDMGSVDLVIQVTPPLSVSSGLQRVGRADHRVGG
VSHAVMYPVTREQIIGIGASVEGMLNGAIEPLHMPMNPLDVLAQQTVAAASLEPIAADDW
YATVRRAAPFASLDRAMFDAVVGMLTGAYNSEDFSAFRPPLMFDEDSAMISARPGAQRLA
VTSGGTIPDRGLYTVVLPEAEAGTGPRRVGELDEEMVYETRVGDIITLGTTNWQVQEITN
SRVVVVPAPGRRARLPFWHGEGNGRDYSFGMSLGEWVHDIAAGLQPAHGNVGNAPESRFS
DVVLKRLRADGLDANAMENLAAFLSEQRASTGVIPSGRAVVVERCREEEGDWLVIIHTPF
GRRVHEPWALAINMRLTQRYGFDGQIFAADDGIVLRLPDGEGGIDVGALIDFDPDDIQRI
VENQVSGSVLFAARFREVAARALFMPRNDPGKRVPLWQQRLRATQLLAAARTRKNFPLLL
ETARECLQDVYDVPALREVLTRIRGGAIDVHACETQVPSPMAEHLLFGFVGSVMYQYDVP
QAERNAQLLSMDPLVLERLLGTDNLAQVLDTQVIDSVAGQLASKTFWNELDKHDLRGRVN
RYAKTHGPFTADRLLSELEIDAQTAVELLGELRDAGELINGRFDERLAPGVTQWVHADVL
KRIRSQSLAKARAAIKPVEPERYEAFLVHRQGVGSVGGERLQGLDGLLRAIEQLEGVALP
MPVWERHVFPARVRDYTPTLLDELVGSGDVVWVGDPTGSGEGGDEAGRVMFFPADSPQLQ
VHAEALESSLGRAAAPESDMPLTVRDAILLALHDGGAYTAHSLEERAQSLWQANPEPEVN
ETTGEVMATSWSHSRFEQTLWSLVWHGFITNTSLQPVRSVSTHTGGSKATVRSHRLRLRA
RIPTRGMFGGGLWSLVRTQGDASHEEAMIDLIGILLDRYGIIAPNTVSDAGVAGGFSAIY
PVLKRMEEKGTLLRGVFVKGFGAAQFAERETVDLLRHHIDSEPVMTVTMDVCDPANLYGS
SLEWPAPAILESNARTDSKRRAAVKPIRRPGSLVVLRQGRAVLYAALWSGRIVAFEPSPS
VLKTAATALEQTCSRLHGASITFRDCNGVPLQGGNAMSDALRHAGFTPSPQGLRLYR
NT seq 4674 nt   +upstreamnt  +downstreamnt
atgtgcgaatgtatggcaatgttcagcgaacccacacgcgtgtggttctcacgtgtgttc
ggagaacccaccgaggcgcagcgattggcatggccggcgatcgggcgacgcgagaatgtg
ctggtcatcgcgccgaccggttcgggaaagaccctctccgcgttcctgttcgccatcgac
tcgcttctgtcccgcagtgccgccgaccatgcacgcaaaggcgtgcgcgtgttgtatatc
tcaccgttgaaggcgcttggcgtcgacgtggcgaagaaccttgatgtccctttggccggt
attcgcgaacagatcgatgcccttggctcgcatgcgccgcaggtcaccgtcgccaccaga
agtggagatacgaccccgaaggagcgacgtgcgatcatgtcgcatccgccggacattctg
gtcacgaccccggagtcgctgtatctcatgctcacttcgaaagcgcgcggcatcctgaaa
acggtggataccgtgatcgtggatgaggtgcatgcggtcgccggcacgaaacggggggcg
catctggcgctgagccttgagcgtctcgatgaccttctggaacggccggcacagcgcata
gggctttcggcgacggtgaacccgcctgagcgtgccgcgaagttcctcgcaggagcattg
ccggtgacggtcatcgccaccgggggaaagcctgcactcgacatcactgtggtcgaaccg
gcgaagacccttggtgacgggcccgtggccaatggcaggcgcaaggggggtgctggggag
gtcggcagcacttctgcgccaatgaccggcgtgacgcccgcgatgcaacgcttggcggag
cgcaaggcgagggaacgggatggccaaggcgatccgcaatctgcaaccaccggcgagaca
accaagcgatggggggattcgctgccgccgggtacgccggtgagcgaaggcgcgcacaat
ccgtcgggggtgaaatccgcgtggccggcgatccaacgccatattctcgacgagatactc
tcgcaccgcaccacattggtgtttgtgaattcgcgcggcctatgcgaacgcctgaccgcg
cagatcaacgatctgcacgcacaacggctcggcaaacgcaatccggtggaactgccgacc
agcgagacggacgagccagcccactatcattccacgtatgggtccaccacaatgaaagtg
ggggcgcacggccctgacgagcagattgccatggcgcatcacgggtcggtgtcgaaagac
cgccgcaagcaaatagaggagagactcaaatccggacgtctgcgttgtgtggtggcgacg
agcagtctggagctcggcattgacatggggtcggtggatctggtgattcaggtgacgccg
ccgttgtcggtctcctctggcctgcagcgcgtgggccgagccgaccatagggtgggggga
gtctcgcacgccgtcatgtacccggtgacacgcgaacagatcatcggcataggtgccagt
gtggaaggcatgctcaacggggcgattgaaccattgcatatgccaatgaatcctttggac
gtgctcgcgcagcagaccgtggcggccgccagtctggagcccatcgccgccgatgattgg
tatgcgacggtgagacgcgccgcccccttcgcctcgttggaccgggcgatgttcgacgcc
gtggtgggcatgctcaccggcgcctataattccgaggacttctcggcatttcgaccaccg
ctcatgttcgacgaggattcggccatgatctcggcgcgtccgggtgcacagcgcctcgcg
gtgaccagcggcggcacgattcccgaccgcggtctctacactgtagtgctgcccgaggcc
gaggcgggaacaggtccgagacgggttggtgagctcgacgaggagatggtgtatgagaca
cgggtgggtgacatcatcacactcggcaccacgaattggcaggtgcaggaaatcacgaac
tcccgcgtggtcgtggtgccggcgcccggacgaagggcacgcctgccgttctggcatggg
gagggcaacgggcgcgattattccttcggcatgtcgcttggggaatgggtgcatgacatc
gccgcgggattgcaaccggcgcacggcaatgtcgggaacgcgccggaatcccgattcagc
gacgtggttctcaaacgcctgcgagccgatggtctggacgccaacgctatggagaatctg
gcggccttcctctccgagcagcgggcgagcaccggtgtgatcccgagcggtcgtgcggtt
gtggtcgaacgctgccgcgaggaggagggcgattggctcgtgatcattcatacgccgttc
gggcgtcgtgtgcatgagccatgggcgctcgcaatcaacatgaggttgacgcagcgttat
ggtttcgacgggcagatcttcgccgccgacgatggcatcgtgctgcgtctgcccgatggg
gaaggaggcatcgacgtcggcgcgctcatcgacttcgaccccgatgacattcagcgcatc
gtggagaaccaggtctccggcagtgtgctgttcgccgcccgattccgtgaggtcgcggcg
cgtgcgctgttcatgccgaggaacgacccgggcaaacgagtgcctctatggcagcagagg
ctgagggccacccagctgctggccgcggcgcgcacgaggaagaacttcccgctgctgctc
gagaccgcccgcgaatgtctgcaggacgtctacgacgttcctgccctccgcgaagtgctc
acccgcatacgtgggggagccatcgacgtgcatgcatgcgagacgcaagtgccatcgcct
atggccgagcatcttctgttcggtttcgtggggtcggtgatgtaccagtacgatgtgccg
caggccgaacgcaatgcgcaactgctctcgatggatccgctggtgctggaacggttgttg
gggacggacaacctggcccaggtgctcgatacacaggtgatcgattcagtggccggccag
ctggcttcgaagaccttctggaacgaactcgacaagcacgatctgcggggacgcgtgaat
cgctacgccaagacgcatggaccgttcactgccgatcgcctgctctccgaacttgagatc
gacgcgcagacggccgtcgaactgcttggtgaactgcgcgatgccggcgagctcatcaac
ggtcgtttcgacgaacgactcgctccgggggtgacgcaatgggtgcatgccgacgtgctc
aaacgcattcgctcgcagtcgttggccaaggcccgggcggcaatcaaacctgtggaaccc
gagcggtacgaggcgtttctcgttcatcggcagggtgtcggctcggtgggcggcgaacgg
ttgcaaggtctggatggactcttgcgtgccattgaacagctggagggtgtcgcattgccg
atgcccgtgtgggagcgccacgtgttcccggcccgtgtgcgagattacacgccgacattg
ctcgacgagctggttggctccggcgatgtggtatgggtgggtgatcccacgggcagcggc
gaagggggtgacgaggcgggacgcgtcatgttcttcccggcggactccccacagttgcag
gtgcatgctgaggcattggaatcctccctaggtcgagcggctgcgccggaatccgacatg
ccgctgacggtgcgcgatgcgatactgcttgccctgcacgacggtggcgcttacacggcg
cactcattggaggagcgtgcgcaatccctgtggcaggcgaatccggagccggaggtgaat
gagacgaccggcgaggtgatggccacatcatggtcccattcgcgattcgagcagacccta
tggtcattggtctggcatggattcattaccaacacctccctgcaaccagtccggtcggtg
tcaacgcatacgggtggaagtaaggccacggtgcggtcgcatcgtctccgcttgcgtgcc
cgaatacccacacgcggtatgttcggcggcggtctgtggtcactggtgcgcacccaaggc
gatgcgagccatgaggaggcgatgatcgacctgataggtattctgctcgaccgctacggc
atcattgcgcccaatacggtgtcagatgccggtgtcgccggcggattcagtgccatttat
ccggtgctcaaacgcatggaggagaaaggcacgctattgcgaggtgtattcgtcaagggg
ttcggtgccgctcaattcgccgagcgggagacggtggacctgctgcgtcaccatatcgat
tccgagcctgtcatgaccgtcaccatggatgtatgcgatccggcgaatctctatggttcg
tcattggaatggccggcgccggccatacttgaatccaatgcccgcacggactccaaacgg
cgcgctgccgtgaaaccaatacgacgcccgggctcattggtggtgctgcgtcaggggcgc
gcggtgctgtatgcggcactgtggtcgggtcgtatcgtggcgttcgagccttcgccgagc
gtgcttaaaacggcggcgacggctttggaacagacatgttcgcgattgcatggggccagc
atcactttccgtgattgcaacggcgtgccattgcagggcggcaacgcgatgtccgacgcc
cttcggcatgccggattcaccccgtcgccgcaggggctccgactgtatcgatga

DBGET integrated database retrieval system