Bifidobacterium animalis subsp. lactis Bl12: BL12_06400
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Entry
BL12_06400 CDS
T02712
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bani
Bifidobacterium animalis subsp. lactis Bl12
Pathway
bani03030
DNA replication
bani03430
Mismatch repair
bani03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BL12_06400
03430 Mismatch repair
BL12_06400
03440 Homologous recombination
BL12_06400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bani03032
]
BL12_06400
03400 DNA repair and recombination proteins [BR:
bani03400
]
BL12_06400
Enzymes [BR:
bani01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BL12_06400
DNA replication proteins [BR:
bani03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BL12_06400
DNA repair and recombination proteins [BR:
bani03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BL12_06400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
DEDDh_C
SAM_MT
Motif
Other DBs
NCBI-ProteinID:
AGO52717
LinkDB
All DBs
Position
1475695..1476261
Genome browser
AA seq
188 aa
AA seq
DB search
MKPASRIPMNYISLDLETTGFSAQNDRITEIGAVKVRDGKIVDRFTQLVNPGRRVSARIT
ELTGISNEMLEDQPVIEDILGDFIHWTENDRLVGHNTKFDLSFLIANAERVFSDSTRFSV
RPIDTMHIDRLLFPSERHRLVDLIQRYGIGDVEEHRALSDATQTYQCLEWQRRYIDTRSA
DISMRTCV
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagcatcgcgaatccccatgaattacatctcactcgatctggagacgaccggc
ttcagcgcacagaatgaccgtatcaccgagattggcgccgtcaaagtgcgcgacggcaag
atagtggatcggttcacgcagctcgtcaatcccggcaggcgcgtctccgcacgcataacg
gagctcacgggcatttccaacgagatgctcgaagaccagcccgtcatagaagacatactc
ggggatttcatacactggaccgagaatgaccgtttggtgggacataacaccaaattcgat
ctctcattcctcattgccaatgcggaacgtgtgttcagcgactccacacgcttttccgtg
cgtcccattgacaccatgcatatagaccgactgctgttcccctctgaacggcatcgtctt
gtcgatctgatccagcgttacggcattggcgatgttgaggagcaccgcgcgctttctgac
gccacgcagacgtaccaatgcttggaatggcagcggcgttatattgacacccgctcggca
gacatctccatgcgtacgtgcgtgtga
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