Bifidobacterium animalis subsp. lactis Bl12: Bl12_0301
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Entry
Bl12_0301 CDS
T02712
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bani
Bifidobacterium animalis subsp. lactis Bl12
Pathway
bani03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bani00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bl12_0301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bani03019
]
Bl12_0301
03016 Transfer RNA biogenesis [BR:
bani03016
]
Bl12_0301
Enzymes [BR:
bani01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Bl12_0301
Messenger RNA biogenesis [BR:
bani03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Bl12_0301
Transfer RNA biogenesis [BR:
bani03016
]
Prokaryotic type
tRNA degradation factors
Bl12_0301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH_2
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AGO51819
LinkDB
All DBs
Position
399876..402497
Genome browser
AA seq
873 aa
AA seq
DB search
MEGPEIKAVEAVIDNGSFGRRTVRFETGRLARQADGAVAAYLDDDSMVLSTTTAGSSPKE
NYDFFPLTVDVEEKMYAAGKIPGSFFRREGRPSSEAILACRIIDRPLRPLFPHTLRNEVQ
VVETVLAVNPEDSYDVLALNAASASTLISGLPFTGPVGGVRLALIDGQWVAFPRWSERER
AVFEIVVAGRVVESGDVAIAMIEAGAGKNAWNLIYDEGQQKPDEEVVAGGLEAAKPFIKV
LCDAQNELKRLAAKETREFTLFPEYTDDLYNRIDEIAHADLDEALSIAEKLPRQERIAEI
KQRVKDTLSVEFTDMDEMEKDKEIGNAFKELQRQIVRRRILTQDYRIDGRGLRDIRTLSA
EIDVVPRVHGSALFQRGETQILGITTLNMLKMEQQIDALSGPTTKRYMHNYEMPPYSTGE
TGRVGSPKRREIGHGALAEKAIVPVLPSREEFPYAIRQVSEAIGSNGSTSMGSVCASTLS
LLAAGVPLKAPVAGIAMGLVSGDVDGQHIYKTLTDILGAEDAFGDMDFKVAGTADFITAL
QLDTKLDGIPADVLAGALKQAHEARKTILEVINECIDGPAEMSPFAPRIITTTVPVDKIG
EVIGPKGKMINQIQEDTGAEIAIEDDGTVYISSEGGEAAEKAKQIIDEIANPHVPQAGET
YKGTVVKTTSFGAFVNLTPGIDGLLHISQIRNLADGQRIDAVEDVLKEGDSVEVVVQGVD
DRGKISLAIPGFENQENNAGGRRSDDRPRRDDRRHSDDRRRDDRPRRRSDDRDRDYDDRP
RRRRDYDDDRDYDDRPRRRSHRDYDDDRDYDDRPRRSDRRRDYDDDRPRRRRNDDRNPRY
VADENYDEYREGREVRHERPRRRVRRDFDPFDD
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcccgaaatcaaggctgttgaagccgtaattgacaatggttcgttcggcagg
cgcacggtgcgcttcgagaccggacggctcgcccggcaggcggacggcgccgtggccgcc
tacctcgacgacgattcgatggtgctttccaccacgaccgccggctccagcccgaaggag
aactacgacttcttcccgctcaccgtggacgtggaggagaagatgtacgcggccggcaag
atccccggctcgttcttccgccgtgaaggccgcccgagctccgaggccattctggcttgc
cgcattatcgaccgtccgctacgcccgctcttcccgcacacgctgcgcaacgaggtgcag
gtcgtggagaccgtgctcgccgtgaacccggaggattcctacgacgtgctcgccctgaac
gcggcctccgcctccacgctcatctccggcctgccgttcaccggcccggtcggtggcgtg
cggctcgccctgatcgacggccagtgggtcgcgttcccgcgttggagcgaacgtgagcgc
gccgtgttcgagatcgtggtggccggtcgtgtggtcgaaagcggcgacgtcgccatcgcc
atgatcgaggccggtgccggcaagaacgcatggaacctcatttatgacgaaggccagcag
aagccggatgaagaggtcgtggccggcggtctggaggccgccaagccgttcatcaaggtg
ctgtgcgatgcacagaacgagctcaagcgcctcgccgccaaggagacccgcgagttcacg
ctgttcccggagtacactgacgacctgtacaaccgcatcgacgagatcgcgcacgccgac
ctagatgaggcgctgtcgatcgccgagaagctgccgcgtcaggagcgcatcgccgagatc
aagcagcgcgtcaaggacacgctgtccgtcgagttcaccgacatggacgagatggagaaa
gacaaggagatcggcaacgcgttcaaggagctgcagcgccagatcgtgcgccgtcgcatc
ctcacgcaggactaccgcatcgacggccgtggcctgcgtgacatccgcacgctctccgcc
gagatcgacgtggtgccccgcgtgcatggctccgccctgttccagcgcggcgaaacccag
attctgggcatcaccacgctcaacatgctcaagatggagcagcagatcgacgccctgtcg
ggcccgaccaccaagcgctatatgcacaactacgagatgccgccgtattcgaccggcgag
accggtcgcgtcggctccccgaagcgccgcgaaatcggccacggcgccctcgccgagaag
gccatcgtgccggtgcttcccagccgtgaggagttcccgtacgccatccgccaggtctcc
gaggccatcggatccaacggttccacctctatgggttctgtgtgcgcctcaacgctgtcg
ctgctcgcagccggcgtgccgctcaaggcaccggtggccggcatcgcgatgggtctggtc
tccggtgacgtggacggccagcacatctacaagacgctcaccgacattctcggtgccgaa
gacgccttcggcgacatggacttcaaggtcgccggcaccgccgacttcatcaccgccctg
cagctcgacaccaagctcgacggcattccggccgacgtgcttgccggtgcgctcaagcag
gcccatgaagcacgcaagaccattctcgaggtgatcaacgagtgcatcgacggcccggcc
gagatgagcccgttcgcaccgcgcatcatcaccaccaccgtcccggtggacaagatcggc
gaggtcattggcccgaagggcaagatgatcaaccagatccaggaagacaccggcgccgag
atcgcgatcgaagacgacggcaccgtctacatctcctccgaaggtggcgaggccgccgag
aaggcgaagcagatcatcgacgagatcgccaacccgcacgtgccgcaggccggcgagacc
tacaagggcaccgtggtgaagaccacgtcgttcggcgccttcgtcaacctgacgccgggc
atcgatggcctgctgcacatctcgcagattcgcaacctcgccgatggccagcgcatcgac
gccgtcgaggacgtgctcaaggaaggcgattccgtggaggtcgtggtgcagggcgtcgac
gaccgcggcaagatctccctggccatcccgggcttcgagaaccaggagaacaatgccggt
ggacgccgttccgacgaccgtccgcgccgtgatgaccgccgtcattccgacgaccgccgc
cgtgacgaccgtccgcgccgccgttccgacgaccgtgaccgtgactacgacgaccgtccg
cgccgtcgccgtgactacgacgatgaccgtgattacgatgatcgtccgcgtcgccgctca
caccgtgactacgatgacgatcgcgattacgatgatcgtccgcgccgctccgaccgtcgc
cgtgactacgacgatgaccgtccgcgccgtcgccgcaatgatgatcgcaatccgcgctat
gtcgccgatgagaactacgacgaataccgcgagggacgtgaggtgcgccacgagcgtccg
cgtcgtcgtgtgcgccgcgacttcgatccgttcgacgactga
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