Bifidobacterium animalis subsp. lactis ATCC 27673: BLAC_07375
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Entry
BLAC_07375 CDS
T02862
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
banl
Bifidobacterium animalis subsp. lactis ATCC 27673
Pathway
banl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
banl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BLAC_07375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
banl03021
]
BLAC_07375
03019 Messenger RNA biogenesis [BR:
banl03019
]
BLAC_07375
Transcription machinery [BR:
banl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BLAC_07375
Messenger RNA biogenesis [BR:
banl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BLAC_07375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
PIP5K
Spore_III_AA
SAP
Motif
Other DBs
NCBI-ProteinID:
AGW85646
LinkDB
All DBs
Position
complement(1755193..1757196)
Genome browser
AA seq
667 aa
AA seq
DB search
MKLPELKEIAKELGLRGLSAKRKGDLVAAIEEARAKQSSAKSETAPAQAEQPAGHDDAVS
VPVRKTGARRVVRKAGEPKAVEESAAEQPTQVKEEGHAALPAEEEMTQIRGRRVRGKRRQ
MESADQAATNGETSAAEQLLSTLNLPEHAERGGEQPRRRRGAVDSLPTRRRAGAAAVREP
DAEAKPDLDDILSSLPLSANDDESDERHEEHAHRRGERGSRTNDRSNARADRENRQHRRN
HNERDYEEREEGNERRSRDERGNNRNERNNRNDRNERREENTEDLVEVGGIVDVLDSYAF
IRTSGYLPGPNDIYVSMGQIKKYGLRKGDAVRGYTRAPHEGERRNQRQKFMPLQSITLIN
GLSVEEAQDRPNFSKLTPLYPDERLRMETTPNRIIGRLIDIVSPIGKGQRGLIVSPPKAG
KTITLQNIANAIAVNNPEVHLMVVLVDERPEEVTDMERTVKGEIISSTFDRPASDHTIVA
ELAIERAKRLVELGQDVVVLLDSMTRLARAYNIAAPASGRILSGGVDAQALYPPKKFFGA
ARNIENGGSLTIISSALVETGSKMDEVIFEEFKGTGNMELRLSRELADKRLFPAVDINAS
GTRREELITNPQELPVLYSLRRLLGGLEPEQAYQTLVPRLKKTMTNADFFKAIVQQGNSS
LNGGSNN
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcctgagctcaaggagatcgccaaggaacttggcttgcgcggtctttctgcg
aagcgcaagggcgacttggtggcagcgatcgaagaggcccgcgccaagcagtcgtcggcg
aagagcgaaacggcaccggcacaggcggaacagcccgcagggcacgatgatgcagtctcc
gttccggttcgcaagaccggtgcccgacgcgtggtgcgcaaggccggcgagccaaaggca
gtcgaggagtctgctgccgaacagcctacccaggtgaaggaggagggccatgccgccctg
cccgccgaagaggagatgacccagattcgcggtcgccgcgtgcgcgggaagcgccgtcag
atggaatctgcggatcaggctgcgaccaatggtgagacgtccgccgccgagcagctgctg
agcacgctgaatctgcccgagcacgcagagcgcggcggtgagcagccacgtcgccgtcgc
ggtgccgtggactcactgcccacgcggcggcgtgcaggagcggcggccgtgcgtgaaccg
gatgcggaagccaagccagatctagacgacattctctcgtcattgccgctgagtgcgaat
gacgacgagagtgacgaacgtcacgaggagcatgcgcatcgccgtggcgagcgcggaagc
cgcaccaacgaccgttcaaatgcgcgtgccgacagggaaaaccgccagcaccgcaggaac
cacaacgaacgtgactacgaggagcgtgaggagggcaacgaacgccgttcccgcgacgaa
cgtggcaataatcgcaatgagcgcaacaatcgcaacgaccgcaatgagcgtcgcgaggag
aacaccgaggatctcgtggaggtcggcggcatcgtcgacgtgctcgattcctacgcgttc
attcgcacttccgggtacctgcccggaccgaacgacatctatgtgtcgatggggcagatc
aagaagtacggcctgcgcaaaggcgatgccgtgcgcggttacacgcgtgcgccccatgag
ggcgagcgccgcaaccagcgtcagaagttcatgccgttgcagtcgatcacgctcatcaac
ggcctaagcgtggaagaggcacaggatcgcccgaacttcagcaagctcacgccgttgtac
cccgacgagcgcctgcgtatggagaccacgccgaaccgcatcatcggccgcctgatcgac
atcgtttcgccgatcggcaagggccagcgcggcctgatcgtctctccgccgaaagctggc
aagacgatcacgctgcagaacatcgccaatgcgatcgctgtgaacaatcccgaggtgcac
ctcatggtcgtgctcgtcgatgaacgcccggaagaggtcaccgacatggagcgcaccgtg
aagggtgagatcatctcgtccaccttcgaccgcccggcctccgaccataccatcgtcgcc
gagctcgccatcgaacgcgccaagcgcctggtggagctggggcaggacgtggtggtgctg
ctcgattccatgacgcgcctcgcccgcgcctacaacatcgcggcacctgcctcagggcgc
atcctctccggtggtgtggacgcccaggcactctacccgccgaagaagttcttcggtgcc
gcccgcaacatcgaaaacggcggttcgctcaccatcatctcgtcggccctggtggagacc
ggttcgaagatggacgaggtgatcttcgaggagttcaagggcaccggcaacatggagctg
cgtctgagtcgcgaactggccgacaagcgcctgttcccggctgtggacatcaatgcttcc
ggcacccgccgtgaggagctcatcacgaacccgcaggaacttccggtgttgtacagcctg
cgtcgcctgcttggcggtctggagcccgagcaggcctatcagacgctcgtgccgcgcctg
aagaagacgatgacgaatgcagacttcttcaaagcgatcgtgcaacagggcaacagctcg
ctgaacggcggctcgaacaactga
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