KEGG   Burkholderia anthina: JFN94_07790
Entry
JFN94_07790       CDS       T07672                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
bann  Burkholderia anthina
Pathway
bann02024  Quorum sensing
bann03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bann00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    JFN94_07790 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    JFN94_07790 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bann03019]
    JFN94_07790 (hfq)
   03036 Chromosome and associated proteins [BR:bann03036]
    JFN94_07790 (hfq)
Messenger RNA biogenesis [BR:bann03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     JFN94_07790 (hfq)
Chromosome and associated proteins [BR:bann03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    JFN94_07790 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1 SelB_WH1
Other DBs
NCBI-ProteinID: QQK04173
UniProt: A0A7T7AIU7
LinkDB
Position
1:complement(1657041..1657607)
AA seq 188 aa
MANPAESHPQNDFINAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKR
AISTIQLDTGGSRPGGGGPRGPRTGGRPGGREGGGHSPYGSHGGSRESRGDGYGSREPRE
GYGSREPREGYGAPREPREGYAPREPRESYGAPRDAGDASSSPSPSDARGGNGPVIVTRR
RRIVPDGQ
NT seq 567 nt   +upstreamnt  +downstreamnt
atggccaatcccgcagaatcccatccgcaaaacgacttcatcaatgcggcgcgcaaggaa
cgtaagcgcgttgaaatctatctcgtcaacggcattcgtctgacgggttgcatcgagtcg
ttcgaccagtatctggtgatgctgcgcacccccgtgggtctgcaaggcatctacaagcgc
gccatttccacgatccagctcgacaccggcggctcgcgccccggcggcggcggcccgcgc
ggtccgcgcaccggcggccggccgggcggacgcgaaggcggtggccacagcccgtacggc
tcgcacggcggctcccgcgagtcgcgcggcgacggctatggttcgcgtgaaccgcgcgaa
ggctacggctcccgcgaaccgcgcgagggatatggcgcgccgcgcgaaccccgtgaaggc
tatgccccgcgcgaaccgcgcgaaagctacggcgcaccgcgcgacgccggcgacgcatcg
agcagcccgtcgccgtccgatgcacgcggcggcaacgggccggtcatcgtcacgcgccgc
cggcgaatcgtgccggacggccagtaa

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