Burkholderia anthina: JFN94_07790
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Entry
JFN94_07790 CDS
T07672
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
bann
Burkholderia anthina
Pathway
bann02024
Quorum sensing
bann03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bann00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JFN94_07790 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JFN94_07790 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bann03019
]
JFN94_07790 (hfq)
03036 Chromosome and associated proteins [BR:
bann03036
]
JFN94_07790 (hfq)
Messenger RNA biogenesis [BR:
bann03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
JFN94_07790 (hfq)
Chromosome and associated proteins [BR:
bann03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
JFN94_07790 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
SelB_WH1
Motif
Other DBs
NCBI-ProteinID:
QQK04173
UniProt:
A0A7T7AIU7
LinkDB
All DBs
Position
1:complement(1657041..1657607)
Genome browser
AA seq
188 aa
AA seq
DB search
MANPAESHPQNDFINAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKR
AISTIQLDTGGSRPGGGGPRGPRTGGRPGGREGGGHSPYGSHGGSRESRGDGYGSREPRE
GYGSREPREGYGAPREPREGYAPREPRESYGAPRDAGDASSSPSPSDARGGNGPVIVTRR
RRIVPDGQ
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcccgcagaatcccatccgcaaaacgacttcatcaatgcggcgcgcaaggaa
cgtaagcgcgttgaaatctatctcgtcaacggcattcgtctgacgggttgcatcgagtcg
ttcgaccagtatctggtgatgctgcgcacccccgtgggtctgcaaggcatctacaagcgc
gccatttccacgatccagctcgacaccggcggctcgcgccccggcggcggcggcccgcgc
ggtccgcgcaccggcggccggccgggcggacgcgaaggcggtggccacagcccgtacggc
tcgcacggcggctcccgcgagtcgcgcggcgacggctatggttcgcgtgaaccgcgcgaa
ggctacggctcccgcgaaccgcgcgagggatatggcgcgccgcgcgaaccccgtgaaggc
tatgccccgcgcgaaccgcgcgaaagctacggcgcaccgcgcgacgccggcgacgcatcg
agcagcccgtcgccgtccgatgcacgcggcggcaacgggccggtcatcgtcacgcgccgc
cggcgaatcgtgccggacggccagtaa
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