Burkholderia anthina: JFN94_20050
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Entry
JFN94_20050 CDS
T07672
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bann
Burkholderia anthina
Pathway
bann03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JFN94_20050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bann03000
]
JFN94_20050
03400 DNA repair and recombination proteins [BR:
bann03400
]
JFN94_20050
Enzymes [BR:
bann01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
JFN94_20050
Transcription factors [BR:
bann03000
]
Prokaryotic type
Helix-turn-helix
AraC family
JFN94_20050
DNA repair and recombination proteins [BR:
bann03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JFN94_20050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QQK06737
UniProt:
A0A7T7ALC3
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All DBs
Position
2:complement(846637..848115)
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AA seq
492 aa
AA seq
DB search
MVYSRRMRLDPDICYDALLSRNRRFDGWFFVGVSTTGVYCRPVCPVKPPKAQNCSYYPTA
AAAEKAGFRPCMRCRPELAPGHGLLDLSGNLADAAAALIEDGFLNEHAVDALARRVGVTE
RHLRRIFAAQFGVSPVEFAQTHRLLMAKRLLTDTALPVAVVASTAGFGSVRRFNDLFRQR
YGLNPLRLRKGASAAAGGDMTFPLPYRPPFAWAELMQFLAQRQIDGVERIDANGYARVVA
LPNGHGGGDVAGWLSVTHVPQRFALAVTVSPALTPVVPAVLARVRRLFDLDSRPDVIDAH
LGELAHGSPGLRVPGAFDGLEIAIRAIAGEQLAATHAAALLARVAERFGSPVDHASPGLT
HTLPCAATLACAPPTAFEAIGIARDAARAIVSLARAVADGTLALEPMAPLDATLAALRAM
PGFDERAVQYVAMRAMGWPNAFPADDTWLAQRAADRPRIASSASSAPHAARWAPWRAYAA
LHVWRLHGEASR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggtttacagtcgccgcatgcgcctcgatcccgacatctgctacgacgccctgctctcg
cggaaccgccgcttcgacggctggttcttcgtcggcgtgtcgacgacgggcgtgtattgc
cgccccgtttgcccggtgaagccgccgaaggcgcagaactgcagttactatccgaccgcc
gcggcggccgagaaggccggcttccggccgtgcatgcgctgccggcccgagctcgcgccc
ggtcacgggctgctcgacctgtccggcaatctcgccgatgcggccgccgcgctgatcgag
gacggttttctgaacgagcatgcggtcgatgcgctcgcgcggcgggtcggcgtgaccgag
cgccatctgcgccggatcttcgccgcgcagttcggcgtgtcgccggtcgaattcgcgcag
acgcaccggctgctgatggccaagcgcctcctgaccgacaccgcgctgccggtggccgtc
gtcgcctcgaccgccggattcggcagcgtgcggcgcttcaacgacttgttccggcaacgc
tacggcctcaatccgctgcgcctgcgcaagggcgccagcgcagcggccggcggcgacatg
acgttcccgctgccgtaccggccgccgttcgcgtgggccgagctgatgcagtttctcgcg
cagcggcagatcgacggcgtcgagcggatcgacgcgaacggttatgcgcgcgtcgtcgcg
ctgccgaacggacatggcggcggcgatgtcgccggctggttgtccgtgacgcacgtgccg
cagcggttcgcgctcgccgtcaccgtatcgcccgcgctgacgcccgtcgtgccggccgtg
ctcgcgcgcgtgcggcggctgttcgatctcgacagccggcccgacgtgatcgacgcgcac
ctcggcgaactcgcacacggctcgcccggcctgcgcgtgcccggtgcattcgacgggctc
gagattgcgatccgcgcgatcgcgggcgagcagctggcggcaacgcacgccgccgcgcta
ctcgcgcgcgttgccgaacgcttcggctcgccggtggaccacgcgtcgcccgggcttacg
cataccctgccctgcgccgcgacgctcgcttgcgcgccgccgacagccttcgaagcgatc
ggcatcgcgcgcgatgcggcgcgcgctatcgtgtcgctggcacgcgcggtcgccgacggc
acgctcgcgctcgaaccgatggcgccgctcgacgcgacgctcgccgcgttgcgcgcgatg
cccggtttcgacgaacgcgcggtgcagtacgtcgcgatgcgcgcaatgggctggccgaac
gcattccccgccgacgatacatggcttgcacagcgcgccgccgatcgtccgcgcattgca
tcatctgcatccagcgcgccgcatgcggcgcgctgggcgccatggcgcgcgtatgccgca
ctgcatgtgtggcgccttcatggagaagcttcgcgttga
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