Bacillus anthracis A16: A16_39420
Help
Entry
A16_39420 CDS
T02998
Name
(GenBank) Zn-dependent hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bant
Bacillus anthracis A16
Pathway
bant03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bant00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A16_39420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bant03019
]
A16_39420
Messenger RNA biogenesis [BR:
bant03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A16_39420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
AHE91203
LinkDB
All DBs
Position
complement(3610061..3611731)
Genome browser
AA seq
556 aa
AA seq
DB search
MKRKENESVKVFALGGVGEIGKNMYCVEIDSEIFIVDAGLMFPGDEMFGIDIVIPDITYL
VENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGRVDLK
TIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYTGDFKFDQTPIGNSGADLG
KMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNVHRIQ
QVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAILTTG
SQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEVVYYG
ERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGIARENIFIVEKG
DVIGFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLGKDEKK
IISGPEIISRGFVYVRESEALIDRSTEIVRMIVEQSIKEYSIEWSMLKQNIRELLGQFLY
EETKRKPMILPIIMEV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaaagagaatgagtctgttaaagtatttgctcttggtggagtaggtgaaatc
gggaaaaacatgtactgtgttgaaattgattctgaaatctttattgtagatgcagggtta
atgttcccgggagatgaaatgtttggaattgatatcgttattcctgatattacatattta
gtggaaaaccaagagcgagtaaaaggtttatttattactcacggtcatgaagatcatatt
ggtggtattgtttacgtacttcgtaaattatctattccagtgtatgcaacgaaattaaca
gtaggacttatacaagaaaaacttggcgaagcaggtatgttaggccgtgtagacttaaaa
acaatcgattcaaattcaacagtagagtttaatactacaacggtgtcattctttggaacg
acacatagtattccagattctgttggtgtttgtttccatacatcaaaaggtgcgatcgta
tatacgggagactttaaattcgatcaaactccaattggaaatagtggagcagatcttggg
aaaatggctcaaatcggaaatgaaggtgtactatgcctattatctgatagtacaaatgct
gagcgtccaggctatacaggttctgaaaaagaagttggtgtagaaatttctaaagtattc
tacggcgcagaaggacgtattatcgttgcttcatttgcatcgaatgtacatcgtattcaa
caagtatttgatgcagctgctgaaacaggacgaaaagtcgcggttgtaggacgtagtatg
gtgaaagtagtagatatcgcaagacgccttggttatttagatgttccagaaggtatggtt
atttcactacaagaagtagacaatttcccagagaaaaaggtagctattttaacgacaggt
agccaaggcgaaccgatggcagccctttctagaatggcgaagcaagctcataaacaaatt
tcaattcgtaaaggtgatacggttattattgcggcttctccaattccgggtaatgaaata
tctgtatcgaaaattattgatttgttatttagagctggagctgaagttgtttattatggt
gaaagaaaagttcacgtttcaggtcatggtagccaagaagaattaaaactaatgttaaac
ttaatgaaaccgaaatattttgtacccgtacatggtgagtttcgtatgcaaaaagcacat
gcatacttagctgaagatgtaggtattgcaagagaaaatatctttatcgtagaaaaaggc
gatgtaattggttttggtgacgatgaagcaaatttagttggtaaagtgcaagcgggcaat
gtattaattgatggattaggtgtaggtgacgttggtaatatcgttcttcgagatagaaaa
atgttatctcaagatgggatattagtagttgttgtaacacttggtaaagatgaaaagaaa
attatctctggtccagaaatcatttcgcgtggatttgtatatgttcgtgaatcagaagcg
ttaattgaccgttctacagagattgtacgtatgattgttgagcaatcaattaaagaatat
tcaattgaatggtctatgttaaaacaaaatattcgtgaattattaggacagttcttgtac
gaagagacaaagagaaaacctatgattttaccgattattatggaagtataa
DBGET
integrated database retrieval system
