Bicyclus anynana (squinting bush brown): 112043581
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Entry
112043581 CDS
T07476
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG8 isoform X1
KO
K18734
protein SMG8
Organism
bany
Bicyclus anynana (squinting bush brown)
Brite
KEGG Orthology (KO) [BR:
bany00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bany03019
]
112043581
Messenger RNA biogenesis [BR:
bany03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
112043581
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
112043581
NCBI-ProteinID:
XP_023934831
UniProt:
A0A6J1MWG0
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Position
10:complement(355076..365815)
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AA seq
784 aa
AA seq
DB search
MTKVFSISNIPEFSKKERIVVVGVIGKSPYRYPNKTSPLLSGVQSEENDIECHWDERKGI
LYLHAVTYLDTKRLVSLATSLDEDSKSTVKDADAAHWLVAAGELAIESCRAIALIFHLCH
IVVLSSPTHMFDLNYLQLFRAVDGYRAELTAATTEALLRAAAGGAWDTHGRPCCPRLLFH
FRRAPSQLRRAPALLKKLEHAVEDQIYFILRKARIITNVCAKSLFAIPKNEEFVYMSSSE
ECGDARDVSALLRGLVRLCAGAEPGPQPQRSFRQFLQSHLDMALGDGFDDNVGKYAMSTS
FFELPSAWSWRAAAQALAPIYLQAPAADAAGGALFDALATDVRFSQARCAKVLPIAQASY
AEGLPPHYSSQHHLHKVGVALGVVDSMARGPLAAAARARLTAACAATWRTRTLCEAPSLT
GHPCVLPHHDSSVEHSSGVRYVSACNCGRTKCSREDPYSVRAANHSFYTLAADECGTCKT
LQAVHFPVFQPSTPSFRAAAVKGAEGSAARADGKEAEDEGAPPSPASPRSCWSPPDELSP
GSADDDEDAPAPCGDADLELLAVHEPSAPEKSISRQPSTTEYLPGMLHTGSPAGLLPAFP
SWSLVCLGASSLYSHSAGLPEHLQAGFLPHANHLLPWDCALAGRARGRHAPTVKIFFGYE
YECGRGHRFVPAAPENGAGARFAAADVPLAAPCVCRAPGPARLARLHVVTPKAAVAVTLT
PRVQPAPGRPAFTPGAGEPLRLSASAYWVLRFPFVYADERGVVPRSRALAGGCVLAPMFG
LQAE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagtattttctatatcgaatattcctgagttttctaagaaagagcgcatcgtt
gttgttggtgtgatcggcaagtcgccgtaccggtaccccaacaagacgagccccctctta
tcgggcgtgcagagcgaggaaaatgacatagaatgccactgggatgaaaggaaaggcatc
ctctaccttcacgctgtcacatacttagacaccaagaggctggtgtctttggccaccagt
cttgatgaagactcaaagagtactgtgaaagatgcagatgctgcacactggctggtggcg
gcgggcgagctggccatagagtcgtgcagagccattgccctgatattccatctctgccac
attgtggtgctgtcctcacccacgcacatgtttgatctcaactacttgcagctgttcagg
gctgttgatggatatagggcggagttgactgcagccaccaccgaagcgctgctgcgcgcg
gcggcgggcggcgcctgggacacgcacgggcgcccgtgctgcccgcgcctgctgttccac
ttccgccgagcaccctcccagctgcgccgggcgcccgcgcttctcaagaagctggagcac
gcggtggaggaccaaatctactttatactgaggaaagccaggatcatcactaacgtctgc
gctaaatccctctttgcgataccaaaaaatgaagagttcgtgtacatgagctcctcggag
gagtgcggcgacgcgcgcgacgtgagcgcgctgctgcgcgggctggtgcggctgtgcgcg
ggcgccgagccgggcccgcagccgcagcgctccttccgccagttcctgcagagccacctc
gacatggcgctcggcgacggcttcgatgacaacgtcggcaaatacgccatgagcacttcc
ttctttgagctgccgagcgcgtggtcatggcgcgccgcggcgcaggccctggcgccgata
tacctgcaggcgcccgcagcggacgcggccggcggcgcgctgttcgacgcgctggccacc
gacgtgcgcttctcacaagctagatgcgccaaggtgctacctatagcgcaggcttcgtat
gccgaagggttgccgcctcattattccagccaacatcatctgcacaaggtgggcgtggcg
ctgggcgtggtggactccatggcgcgcggcccgctggcggcggcggcgcgcgcgcgcctc
accgcggcgtgcgcggccacgtggcgcacgcgcacgctgtgcgaggcgccctcgctcacc
ggccacccctgcgtgctcccgcaccacgacagctcggtggagcactcgtcgggcgtgcgc
tacgtgagcgcgtgcaactgcgggcgcaccaagtgctcgcgcgaggacccgtacagcgtg
cgcgccgccaaccacagcttctacacgctggccgccgacgagtgcggcacgtgcaagacg
ctgcaggccgtacacttccccgtgttccagccctccacgcccagcttcagggcggcggca
gtaaagggcgcggagggctccgccgcgcgcgccgacggcaaggaggcggaggacgagggc
gcgccgccgtcgcccgcgtcgccgcgctcgtgctggtcgccgcccgacgagctgtcgccc
ggctcggccgacgacgacgaggacgcgccggcgccctgcggcgacgccgacctcgagctg
ctggccgtgcacgagcccagcgcgcccgagaagtcgatcagccgccagccgtccacgacg
gagtacctgcccggcatgctgcacacgggcagccccgccggcctgctgcccgccttcccc
agctggtcgctggtgtgcctgggcgcgtcctcgctgtactcgcacagcgccggcctgccc
gagcacctgcaggccggcttcctgccgcacgccaaccacctgctgccgtgggactgcgcg
ctggcggggcgcgcgcgcggccgccacgcgcccaccgtcaagatcttcttcggctacgag
tacgagtgcgggcgcggccaccgcttcgtgccggcggcgcccgagaacggcgcgggcgcg
cggtttgcggcggccgacgtgccgctggcggcgccgtgcgtgtgccgcgcgcccgggccc
gcgcgcctggcgcgcctgcacgtggtcacgcccaaggcggccgtggccgtgacgctgacg
ccgcgcgtgcagcccgcgccgggccggcccgccttcacgccgggcgcgggcgagccgctg
cggctcagcgcctcggcctactgggtgctgcgcttccccttcgtgtacgccgacgagcgc
ggcgtggtcccgcgctcgcgcgcgctggccggcggctgcgtgctggcgcccatgttcggc
ctgcaggcggaatga
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